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SCNpilot_BF_INOC_scaffold_3919

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3919_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..641)
DNA (639bp) protein (213aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=12494426 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWE1_Thiobacillus_62_9_curated
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
SCNpilot_BF_INOC_scaffold_3919_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(645..932)
DNA (288bp) protein (96aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=12494427 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYA1_FULL_Hydrogenophilal
aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
SCNpilot_BF_INOC_scaffold_3919_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1204..2007
DNA (804bp) protein (268aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=12494428 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rod shape-determining protein MreB
SCNpilot_BF_INOC_scaffold_3919_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2036..2881
DNA (846bp) protein (282aa)
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC id=12494429 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrog
SCNpilot_BF_INOC_scaffold_3919_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2878..3378
DNA (501bp) protein (167aa)
hypothetical protein; K03571 rod shape-determining protein MreD id=12494430 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K03571 rod shape-determining protein MreD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3919_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3386..5278
DNA (1893bp) protein (631aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 id=12494431 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=GWE1_Thiobacillus_62_9_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
SCNpilot_BF_INOC_scaffold_3919_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5265..6365
DNA (1101bp) protein (367aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=12494432 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rod shape-determining protein RodA
SCNpilot_BF_INOC_scaffold_3919_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6753..7151
DNA (399bp) protein (133aa)
rare lipoprotein A; K03642 rare lipoprotein A id=12494433 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rare lipoprotein A; K03642 rare lipoprotein A Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rare lipoprotein A
SCNpilot_BF_INOC_scaffold_3919_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7165..8280
DNA (1116bp) protein (372aa)
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] id=12494434 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] Tax=GWE1_Thiobacillus_62_9_curated
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4)
SCNpilot_BF_INOC_scaffold_3919_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8277..9140
DNA (864bp) protein (288aa)
D-alanine transminase (EC:2.6.1.21); K00824 D-alanine transaminase [EC:2.6.1.21] Tax=GWE1_Thiobacillus_62_9_curated
D-alanine transminase (EC:2.6.1.21)
cytochrome C550 n=1 Tax=Thiobacillus thioparus RepID=UPI0003744C26
SCNpilot_BF_INOC_scaffold_3919_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9137..9550
DNA (414bp) protein (138aa)
hypothetical protein; K09158 hypothetical protein id=12494171 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09158 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3919_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9571..9993
DNA (423bp) protein (141aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=12494172 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipoate-protein ligase B
SCNpilot_BF_INOC_scaffold_3919_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10043..11158
DNA (1116bp) protein (372aa)
anthranilate phosphoribosyltransferase-like protein id=12494173 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
anthranilate phosphoribosyltransferase-like protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
anthranilate phosphoribosyltransferase-like protein
SCNpilot_BF_INOC_scaffold_3919_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11155..11466
DNA (312bp) protein (104aa)
putative dioxygenase ferredoxin subunit; K05710 dioxygenase ferredoxin subunit id=12494174 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative dioxygenase ferredoxin subunit; K05710 dioxygenase ferredoxin subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dioxygenase ferredoxin subunit
SCNpilot_BF_INOC_scaffold_3919_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11562..12488
DNA (927bp) protein (309aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=12494175 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=GWE1_Thiobacillus_62_9_curated
lipoyl synthase
SCNpilot_BF_INOC_scaffold_3919_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12489..13274)
DNA (786bp) protein (262aa)
ABC-2 type transporter, NodJ; K09694 lipooligosaccharide transport system permease protein id=12494176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transporter, NodJ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
SCNpilot_BF_INOC_scaffold_3919_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13429..14334)
DNA (906bp) protein (302aa)
ABC-2 type transporter ATPase; K09695 lipooligosaccharide transport system ATP-binding protein id=12494177 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transporter ATPase
ABC-2 type transporter ATPase {ECO:0000313|EMBL:AAZ96230.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_3919_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14328..14930)
DNA (603bp) protein (201aa)
hypothetical protein; K07018 id=12494178 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K07018 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3919_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14953..15270)
DNA (318bp) protein (106aa)
putative ferredoxin 2fe-2s protein id=12494179 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative ferredoxin 2fe-2s protein Tax=GWE1_Thiobacillus_62_9_curated
ferredoxin 2fe-2s protein
SCNpilot_BF_INOC_scaffold_3919_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15263..15643)
DNA (381bp) protein (127aa)
hypothetical protein id=12494180 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3919_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15860..16483
DNA (624bp) protein (208aa)
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein id=12494181 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein Tax=GWE1_Thiobacillus_62_9_curated
polysaccharide export outer membrane protein
SCNpilot_BF_INOC_scaffold_3919_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16534..18069
DNA (1536bp) protein (512aa)
polysaccharide chain length determinant protein id=12494182 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
polysaccharide chain length determinant protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
polysaccharide chain length determinant protein
SCNpilot_BF_INOC_scaffold_3919_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..19256
DNA (1179bp) protein (393aa)
protein-tyrosine kinase id=12494183 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
protein-tyrosine kinase Tax=GWE1_Thiobacillus_62_9_curated
protein-tyrosine kinase
SCNpilot_BF_INOC_scaffold_3919_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19225..20520
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003640E99
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3919_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20595..20843
DNA (249bp) protein (83aa)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI000381E924
ATPase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATPase
Displaying 25 items

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