ggKbase home page

SCNpilot_BF_INOC_scaffold_5141

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5141_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..432)
DNA (432bp) protein (144aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFY4_THIDA
SCNpilot_BF_INOC_scaffold_5141_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

802..1491
DNA (690bp) protein (230aa)
Putative uncharacterized protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Putative uncharacterized protein id=1319879 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_5141_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1564..2676)
DNA (1113bp) protein (371aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=12494549 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000255|HAMAP-Rule:MF_00086}; Short=AdoMet synthase {ECO:0000255|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000255|HAMAP-Rule:MF_00086};; MAT {ECO:0000255|HAMAP-Rule:MF
SCNpilot_BF_INOC_scaffold_5141_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2893..3765
DNA (873bp) protein (291aa)
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] id=12494548 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipid A biosynthesis lauroyl acyltransferase
SCNpilot_BF_INOC_scaffold_5141_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3762..4676
DNA (915bp) protein (305aa)
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] id=12494547 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipid A biosynthesis lauroyl acyltransferase
SCNpilot_BF_INOC_scaffold_5141_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5511
DNA (420bp) protein (140aa)
hypothetical protein; K06929 id=12494545 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K06929 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5141_7
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5377..5967)
DNA (591bp) protein (197aa)
Uncharacterized protein (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R788_PLAYO
Uncharacterized protein {ECO:0000313|EMBL:KFB66023.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_5141_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6017..6490
DNA (474bp) protein (158aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] id=12494544 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWE1_Thiobacillus_62_9_curated
diaminopimelate epimerase (EC:5.1.1.7)
SCNpilot_BF_INOC_scaffold_5141_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6490..7167
DNA (678bp) protein (226aa)
hypothetical protein; K09921 hypothetical protein id=12494543 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09921 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5141_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8105..10900
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003659589
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase Tax=GWE1_Thiobacillus_62_9_curated
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_5141_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10937..11488)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E7A7F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98483.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_BF_INOC_scaffold_5141_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11485..14580)
DNA (3096bp) protein (1032aa)
Acr/RND family transmembrane transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000380A956
transmembrane drug efflux protein
Probable transmembrane drug efflux protein {ECO:0000313|EMBL:AAZ98484.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_BF_INOC_scaffold_5141_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14577..15653)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003742FAD
secretion protein HlyD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secretion protein HlyD
SCNpilot_BF_INOC_scaffold_5141_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15850..16269
DNA (420bp) protein (140aa)
molecular chaperone DnaK n=1 Tax=Thiobacillus thioparus RepID=UPI00037904ED
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
SCNpilot_BF_INOC_scaffold_5141_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16355..16786
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360C6A9
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ferric uptake regulator family protein
SCNpilot_BF_INOC_scaffold_5141_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17827
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C3E4A
CobW protein Tax=GWE1_Thiobacillus_62_9_curated
cobW protein
Displaying 16 items

View Taxonomy