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SCNpilot_BF_INOC_scaffold_5176

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5176_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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3..980
DNA (978bp) protein (326aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377A54E
Membrane protein {ECO:0000313|EMBL:GAO36231.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter membrane protein
SCNpilot_BF_INOC_scaffold_5176_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1899..2084
DNA (186bp) protein (62aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EFDED
ABC transporter membrane protein
ABC transporter membrane protein {ECO:0000313|EMBL:BAN35267.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuric
SCNpilot_BF_INOC_scaffold_5176_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2086..2538
DNA (453bp) protein (151aa)
cytochrome c class II id=12494939 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c class II
Cytochrome c class II {ECO:0000313|EMBL:BAN35268.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitr
SCNpilot_BF_INOC_scaffold_5176_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2722..3111
DNA (390bp) protein (130aa)
hypothetical protein id=12494940 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35269.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_5176_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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3168..3602
DNA (435bp) protein (145aa)
hypothetical protein id=12494941 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:GAO36227.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_5176_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3599..4999
DNA (1401bp) protein (467aa)
putative exonuclease of the beta-lactamase fold involved in RNA processing id=12494942 bin=THIO_HI species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:EIM02950.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
putative exonuclease of the beta-lactamase fold involved in RNA processing
SCNpilot_BF_INOC_scaffold_5176_7
unknown

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5047..5217
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5176_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5214..6113
DNA (900bp) protein (300aa)
hypothetical protein; K06966 id=12494943 bin=THIO_HI species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDW95242.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_5176_9
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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6113..7612
DNA (1500bp) protein (500aa)
patatin; K07001 NTE family protein id=12494944 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
patatin Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
patatin
Displaying 9 items

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