ggKbase home page

SCNpilot_BF_INOC_scaffold_6589

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6589_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1336
DNA (1335bp) protein (445aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=12494251 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thiamine biosynthesis protein ThiC
SCNpilot_BF_INOC_scaffold_6589_2
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1360..4299)
DNA (2940bp) protein (980aa)
DNA/RNA helicase, superfamily II id=12494250 bin=THIO_HI species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDS51213.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_
type III restriction protein res subunit
SCNpilot_BF_INOC_scaffold_6589_3
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4296..4802)
DNA (507bp) protein (169aa)
Type III restriction-modification system methylation subunit {ECO:0000313|EMBL:CDS51210.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CDS51210.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacte
adenine specific DNA methylase Mod id=12494249 bin=THIO_HI species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA methyltransferase
SCNpilot_BF_INOC_scaffold_6589_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6525..6881
DNA (357bp) protein (119aa)
hypothetical protein id=12494248 bin=THIO_HI species=Herbaspirillum lusitanum genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_6589_5
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6975..7232
DNA (258bp) protein (86aa)
prevent-host-death family protein id=12494247 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prevent-host-death family protein Tax=GWA2_Gallionellales_55_18_curated
prevent-host-death family protein
SCNpilot_BF_INOC_scaffold_6589_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7229..7504
DNA (276bp) protein (92aa)
hypothetical protein id=12494246 bin=THIO_HI species=unknown genus=Methylophilus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
Displaying 6 items

View Taxonomy