ggKbase home page

SCNpilot_BF_INOC_scaffold_1612_24

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(18420..19304)

Top 3 Functional Annotations

Value Algorithm Source
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=12494669 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 295.0
  • Bit_score: 594
  • Evalue 7.70e-167
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 294.0
  • Bit_score: 566
  • Evalue 3.10e-158
tryptophan synthase subunit beta (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 294.0
  • Bit_score: 558
  • Evalue 1.00e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGGCAAGAAGCGCGTCATCGCCGAAACCGGCGCCGGCCAGCACGGCGTCGCCTCGGCCACCGTCGCCGCCCGCTACGGCATGGAGTGCGTCGTCTACATGGGCGCCGAGGACGTCGCCCGGCAGTCGCCCAACGTCTTCCGCATGAAGCTGCTGGGCGCCACCGTGGTGCCGGTATCGTCCGGCTCGAAGACGCTGAAGGACGCCTTGAACGAGGCCATGCGCGACTGGGTCACCAATGTCGAATCGACCTTCTATATTCTGGGAACGGCCGCCGGTCCGCATCCGTATCCCATGCTGGTGCGCGATTTCCAGTGCGTGATCGGGCGCGAATGCCTCGTCCAGATGCCGGAACTGGCGGGACGTCAGCCGGATGCCGTGATCGCCTGCGTCGGCGGCGGCTCCAATGCCATCGGTATTTTCCATCCTTATATCCCGCATGACGGCGTGCGTCTGATCGGGGTCGAGGCGGGCGGCTGCGGCCTTGCCAGCGGAAAACACGCCGCCCCCCTGAATGCCGGCACCCCCGGCGTGCTGCACGGCTTCCGCAGCTACCTGATGCAGGATGAGAACGGCCAGATCATCGAGACCCATTCGATCTCGGCGGGACTGGATTATCCCGGCGTCGGCCCCGAGCACAGTTATCTCAAGGACGCCGGCCGGGCCGAATACGTGGTGATCAACGACGACGAAGCACTGGCCGCTTTCCACGATCTGTGCCGCTTCGAGGGCATCATTCCCGCGCTCGAATCCAGCCATGCCGTCGCTTACGCCAGGAAGCTCGCGCCGACTCTGGGCCAGGACAAGATCATCCTGGTGAATCTCTCCGGTCGCGGCGACAAGGACATCAACACCGTGGCCAGGGAATCGGGCATCACACTCTGA
PROTEIN sequence
Length: 295
MGKKRVIAETGAGQHGVASATVAARYGMECVVYMGAEDVARQSPNVFRMKLLGATVVPVSSGSKTLKDALNEAMRDWVTNVESTFYILGTAAGPHPYPMLVRDFQCVIGRECLVQMPELAGRQPDAVIACVGGGSNAIGIFHPYIPHDGVRLIGVEAGGCGLASGKHAAPLNAGTPGVLHGFRSYLMQDENGQIIETHSISAGLDYPGVGPEHSYLKDAGRAEYVVINDDEALAAFHDLCRFEGIIPALESSHAVAYARKLAPTLGQDKIILVNLSGRGDKDINTVARESGITL*