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SCNpilot_BF_INOC_scaffold_1612

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1612_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=12494692 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
SCNpilot_BF_INOC_scaffold_1612_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376..612)
DNA (237bp) protein (79aa)
hypothetical protein id=12494691 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1612_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(645..1400)
DNA (756bp) protein (252aa)
ABC-2 type transport system permease; K09686 antibiotic transport system permease protein id=12494690 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transport system permease; K09686 antibiotic transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC-2 type transport system permease
SCNpilot_BF_INOC_scaffold_1612_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1397..2305)
DNA (909bp) protein (303aa)
ABC-type multidrug transporter ATPase; K09687 antibiotic transport system ATP-binding protein id=12494689 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-type multidrug transporter ATPase; K09687 antibiotic transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC-type multidrug transporter ATPase
SCNpilot_BF_INOC_scaffold_1612_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2302..2577)
DNA (276bp) protein (92aa)
NTP binding protein; K07122 id=12494688 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NTP binding protein; K07122 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NTP binding protein
SCNpilot_BF_INOC_scaffold_1612_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2577..3212)
DNA (636bp) protein (212aa)
putative signal peptide protein; K07323 putative toluene tolerance protein id=12494687 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative signal peptide protein; K07323 putative toluene tolerance protein Tax=GWE1_Thiobacillus_62_9_curated
signal peptide protein
SCNpilot_BF_INOC_scaffold_1612_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3280..4641)
DNA (1362bp) protein (454aa)
putative outer membrane protein id=12494686 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative outer membrane protein Tax=GWE1_Thiobacillus_62_9_curated
outer membrane protein
SCNpilot_BF_INOC_scaffold_1612_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4638..5105)
DNA (468bp) protein (156aa)
putative ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein id=12494685 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_1612_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..5894)
DNA (789bp) protein (263aa)
hypothetical protein; K02066 putative ABC transport system permease protein id=12494684 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1612_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6780)
DNA (894bp) protein (298aa)
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein id=12494683 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_1612_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6786..7247)
DNA (462bp) protein (154aa)
hypothetical protein id=12494682 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1612_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7305..8723)
DNA (1419bp) protein (473aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=12494681 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rul
SCNpilot_BF_INOC_scaffold_1612_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8789..9349
DNA (561bp) protein (187aa)
TPR repeat-containing protein id=12494680 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
TPR repeat-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TPR repeat-containing protein
SCNpilot_BF_INOC_scaffold_1612_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9427..9918
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] id=12494679 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=GWE1_Thiobacillus_62_9_curated
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
SCNpilot_BF_INOC_scaffold_1612_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9927..10676
DNA (750bp) protein (250aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=12494678 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=GWE1_Thiobacillus_62_9_curated
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
SCNpilot_BF_INOC_scaffold_1612_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..11321)
DNA (651bp) protein (217aa)
hypothetical protein id=12494677 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1612_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11321..12493)
DNA (1173bp) protein (391aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] id=12494676 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] Tax=GWE1_Thiobacillus_62_9_curated
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
SCNpilot_BF_INOC_scaffold_1612_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12651..14174)
DNA (1524bp) protein (508aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=12494675 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
amidophosphoribosyltransferase (EC:2.4.2.14)
SCNpilot_BF_INOC_scaffold_1612_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14196..14687)
DNA (492bp) protein (164aa)
colicin V production protein; K03558 membrane protein required for colicin V production id=12494674 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
colicin V production protein; K03558 membrane protein required for colicin V production Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
colicin V production protein
SCNpilot_BF_INOC_scaffold_1612_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14684..15337)
DNA (654bp) protein (218aa)
hypothetical protein; K03749 DedD protein id=12494673 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K03749 DedD protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1612_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15318..16589)
DNA (1272bp) protein (424aa)
folylpolyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=12494672 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
folylpolyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
folylpolyglutamate synthetase
SCNpilot_BF_INOC_scaffold_1612_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16687..17556)
DNA (870bp) protein (290aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=12494671 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
SCNpilot_BF_INOC_scaffold_1612_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17570..18376)
DNA (807bp) protein (269aa)
tryptophan synthase, subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=12494670 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tryptophan synthase, subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWE1_Thiobacillus_62_9_curated
tryptophan synthase subunit alpha (EC:4.2.1.20)
SCNpilot_BF_INOC_scaffold_1612_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19304)
DNA (885bp) protein (295aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=12494669 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
SCNpilot_BF_INOC_scaffold_1612_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19583..20218)
DNA (636bp) protein (212aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=12494668 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000255|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000255|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000255|HAMAP-Rule:MF_00135};; TaxID=292415 species="Bact
SCNpilot_BF_INOC_scaffold_1612_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20200..20982)
DNA (783bp) protein (261aa)
truA, hisT; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=12493950 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
truA, hisT; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
SCNpilot_BF_INOC_scaffold_1612_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20995..21474)
DNA (480bp) protein (160aa)
hypothetical protein id=12493949 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying 27 items

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