ggKbase home page

SCNpilot_BF_INOC_scaffold_2418_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(5353..6408)

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein id=12494729 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 700
  • Evalue 6.90e-199
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 340.0
  • Bit_score: 416
  • Evalue 5.60e-114
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABD70951.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 340.0
  • Bit_score: 416
  • Evalue 2.80e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCTCCGCTCGTGCCTCAACCGCCGCATCCTGTGCCTCTGGCTGGTGTTTGCCGCCCTGCAGGGGGTGACACATTCCGCCCTGGCCATGGAGACGCTGCGCATTCTTGCATGGCCCGGCTATGCCGACGCGGATCTGGTCAAGGTATTCGAACAGCGCCACGGGGTGCGTGTGGAAGTCACCCTGGTCGGCAATGACGACATTCTGCGGGAGAAGATGGCGGCCGGAAGCGGCGCCCACTTCGATGTCATCGCCGCCAACACGGCCGAGATGGTGCATTACATCGACAGCGGTCTGATCCAGCCGATCGAGACAGGCAACATTCCCAATCTGCGCCGGCAACTGCCCCGCTTCAGGCCCTTGAGCGCCATCCCCGGTATTACCCGGGCCGGCAGCGTGTACGCCATTCCTTATACCTATTCCGAAATGGGCCTGATCTACGATCGCCGACGCTTCAAGACCGCCCCGGCTTCGTACGCCGACTTGTGGAATCCCCGCTACGCCGGGCAAATACTGCTGTTCGATGGCGGTACGCATAATTTCTCGCTGGCGGCCATGGCGCTGGGGCTCGATCCGTTCCGCATTCCGTCCGCAGAATTCCCGCGCGCACTGAAGAAGCTGCTGGCTTTGCGCCGTAATGCGCTGGTGTTCTACAGCCTGCCCGAAGAAGCGGCCCGGTTGTTTCGCGAACAGTCCGCTGCCCTGCTGTTTGCCAACTACGGCAGCCAGCAGGTCAAGTTGCTGCGCGACGCCGGGGTCGACATCGGCTATGCCGTCCCGCGCACCGGCGCACTGGCCTGGCTCGATTGCTGGGCCGTCAGCCGCGGAGCGCGTAACAAGGCACTGGCGGAAGCATGGATCAATTACACGCTGGAGCCCGGCGTCAGCCACGCCTTGAGTGTGCGCCAGGGACTGGCCAACACCCTGGAAACCTCCGCCGCCTCGCGCCCCGGCGATCCCCTCATCTGGCTCGAACCGGTAGAAGACGGCGCCCGGCGTACCCGGTTATGGCAGCGCATCCTGTCCGGCGAGCGCGAAGCCCTCCTGCTGCAATGA
PROTEIN sequence
Length: 352
MLRSCLNRRILCLWLVFAALQGVTHSALAMETLRILAWPGYADADLVKVFEQRHGVRVEVTLVGNDDILREKMAAGSGAHFDVIAANTAEMVHYIDSGLIQPIETGNIPNLRRQLPRFRPLSAIPGITRAGSVYAIPYTYSEMGLIYDRRRFKTAPASYADLWNPRYAGQILLFDGGTHNFSLAAMALGLDPFRIPSAEFPRALKKLLALRRNALVFYSLPEEAARLFREQSAALLFANYGSQQVKLLRDAGVDIGYAVPRTGALAWLDCWAVSRGARNKALAEAWINYTLEPGVSHALSVRQGLANTLETSAASRPGDPLIWLEPVEDGARRTRLWQRILSGEREALLLQ*