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SCNpilot_BF_INOC_scaffold_2418

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2418_1
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
hypothetical protein; K09857 hypothetical protein id=12494734 bin=THIO_HI species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT51213.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source=
SCNpilot_BF_INOC_scaffold_2418_2
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395..2077)
DNA (1683bp) protein (561aa)
mammalian cell entry domain-containing protein; K06192 paraquat-inducible protein B id=12494733 bin=THIO_HI species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ACT51214.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Met
SCNpilot_BF_INOC_scaffold_2418_3
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2070..2756)
DNA (687bp) protein (229aa)
pqiA; paraquat-inducible protein a; K03808 paraquat-inducible protein A id=12494732 bin=THIO_HI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
pqiA; paraquat-inducible protein a
Paraquat-inducible protein A {ECO:0000313|EMBL:ACT51215.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus
SCNpilot_BF_INOC_scaffold_2418_4
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2753..3388)
DNA (636bp) protein (212aa)
paraquat-inducible protein a; K03808 paraquat-inducible protein A id=12494731 bin=THIO_HI species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
paraquat-inducible protein a
Paraquat-inducible protein A {ECO:0000313|EMBL:ACT51216.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus
SCNpilot_BF_INOC_scaffold_2418_5
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3614..5356)
DNA (1743bp) protein (581aa)
diguanylate cyclase id=12494730 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_2418_6
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..6408)
DNA (1056bp) protein (352aa)
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein id=12494729 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
extracellular solute-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABD70951.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rh
SCNpilot_BF_INOC_scaffold_2418_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6510..7175)
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003650186
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2418_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7172..7981)
DNA (810bp) protein (270aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] id=12494728 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
SCNpilot_BF_INOC_scaffold_2418_9
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8549..9433)
DNA (885bp) protein (295aa)
phenazine biosynthesis protein PhzF family protein id=12494727 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phenazine biosynthesis protein PhzF family protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
phenazine biosynthesis protein PhzF family protein
SCNpilot_BF_INOC_scaffold_2418_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9498..10238)
DNA (741bp) protein (247aa)
hypothetical protein id=12494726 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2418_11
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10367..11719)
DNA (1353bp) protein (451aa)
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit id=12494725 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
SCNpilot_BF_INOC_scaffold_2418_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12032..12334)
DNA (303bp) protein (101aa)
cynR; DNA-binding transcriptional regulator CynR; K11921 LysR family transcriptional regulator id=12494724 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cynR; DNA-binding transcriptional regulator CynR; K11921 LysR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cynR; DNA-binding transcriptional regulator CynR
SCNpilot_BF_INOC_scaffold_2418_13
unknown

Not on your lists

12640..12855
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2418_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13200..13892
DNA (693bp) protein (231aa)
hypothetical protein id=12494723 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47205.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_BF_INOC_scaffold_2418_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13996..14436
DNA (441bp) protein (147aa)
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] id=12494722 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cyanate hydratase (EC:4.2.1.104)
SCNpilot_BF_INOC_scaffold_2418_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..15500
DNA (822bp) protein (274aa)
hypothetical protein id=12494721 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2418_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16096..16521
DNA (426bp) protein (142aa)
hypothetical protein id=12494720 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2418_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16508..16948
DNA (441bp) protein (147aa)
Thiocyanate hydrolase subunit alpha id=12494719 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Nitrile hydratase beta subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2418_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17027..17464
DNA (438bp) protein (146aa)
DGC domain-containing protein id=12494718 bin=THIO_HI species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DGC domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DGC domain-containing protein
SCNpilot_BF_INOC_scaffold_2418_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17529..19292
DNA (1764bp) protein (588aa)
putative acetolactate synthase large subunit id=12494717 bin=THIO_HI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative acetolactate synthase large subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
putative acetolactate synthase large subunit
Displaying 20 items

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