ggKbase home page

SCNpilot_BF_INOC_scaffold_2744_8

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 3521..4225

Top 3 Functional Annotations

Value Algorithm Source
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=12495317 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 463
  • Evalue 1.20e-127
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 234.0
  • Bit_score: 453
  • Evalue 3.60e-125
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 234.0
  • Bit_score: 453
  • Evalue 1.80e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGGACAAAAAATACATCCGATTGGGTTCCGCCTCGGTGTTCAGCGTATCTGGACAGCCAAGTGGTACGGTTCGAACCGGAATTTCTCCAGCACCTTGCTCGAAGACATCAAGGTTCGCGACTATCTGAAGAAGAAGCTTGCGCATGCGTCGGTCTCCAAGGTGCTGATCGAGCGCCCGGCGAAGAATGCGCGGATCACGATTTTCAGCGGCCGCCCCGGTGTGGTGATCGGCAAGAAGGGCGAGGACATCGAGGTGTTGCGCGGTGAACTGGCGCGTCTGATGTCGGTCCCCGTTCATGTCAACATCGAGGAAGTGCGCAAGCCGGAAACCGATGCGCAGATCATTGCCGATGGCGTGGCTCAGCAGCTGGAGAAGCGCGTGATGTTCCGTCGCGCGATGAAACGCGCCATGCAGAATGCGATGCGTCTGGGTGCCCAGGGCGTCAAGATCATGAGCTCGGGTCGTCTGAACGGAGCGGAGATCGCGCGTACCGAATGGTACCGTGAAGGCCGCGTGCCCCTGCACACGCTGCGTGCCGAAATCGACTATGGCTTTGCCGAGGCGAAAACGACCTACGGCATCATCGGCATCAAGGTGTGGGTCTACAAGGGCGATGCGCTGGGCCGGGGTGAGCAGCCTGTGGCCGCAGAACAGGACAAGCGCGGCAAGAAATCAGGAGTGAAACATGCTGCAGCCAGCTAG
PROTEIN sequence
Length: 235
MGQKIHPIGFRLGVQRIWTAKWYGSNRNFSSTLLEDIKVRDYLKKKLAHASVSKVLIERPAKNARITIFSGRPGVVIGKKGEDIEVLRGELARLMSVPVHVNIEEVRKPETDAQIIADGVAQQLEKRVMFRRAMKRAMQNAMRLGAQGVKIMSSGRLNGAEIARTEWYREGRVPLHTLRAEIDYGFAEAKTTYGIIGIKVWVYKGDALGRGEQPVAAEQDKRGKKSGVKHAAAS*