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SCNpilot_BF_INOC_scaffold_2744_19

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 8612..8797

Top 3 Functional Annotations

Value Algorithm Source
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=12495305 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 6.20e-26
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 61.0
  • Bit_score: 117
  • Evalue 8.00e-24
rpmD; 50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 61.0
  • Bit_score: 115
  • Evalue 4.70e-24

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGAGTGAGCAGAAGACAATCAAGGTGACGCTGGTCAAAAGCCTGATCGGCACCAAAGCGGCGCATCGTGCCTGTGTGCGCGGTCTGGGCCTGCGCCGGATGAACCATACCGTTGAAGTGCTGGATACGCCGGAAAACCGCGGGATGATTACCAAAGTCACCTATCTGGTGAAGTGCGAGGCTTAA
PROTEIN sequence
Length: 62
MSEQKTIKVTLVKSLIGTKAAHRACVRGLGLRRMNHTVEVLDTPENRGMITKVTYLVKCEA*