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SCNpilot_BF_INOC_scaffold_2744_26

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 11807..12436

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 418
  • Evalue 3.10e-114
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 209.0
  • Bit_score: 404
  • Evalue 1.10e-109
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 209.0
  • Bit_score: 395
  • Evalue 8.00e-108

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTAATCTTGATCCCAAATGCCGCCAGTGCCGTCGTGAGGGCGAAAAGCTCTTTCTGAAAGGCGAGAAGTGCTTTACCGACAAATGTGCGATTGAACGTCGCGCCTACGCGCCTGGCCAGCATGGCCAGAAAAGCGGCGCGCGTCTGTCCGGCTATGGCGTGCAACTGCGTGAGAAGCAGAAAATCCGCCGTATCTACGGCGTTCTGGAAGGCCAGTTTCGCCTGACCTACAAACGCGCGGAAGGCCGCAAGGGCGTAACCGGCGAAAACCTGCTGTCCATGCTGGAATCGCGTCTGGATTCGGTGTGTTACCGCATGGGCTTTGGCGCGTCGCGCACCGAGGCGCGTCAGGTGGTCCGCCACAACGGCATCAACGTGAACGGCCGTCGCGTCAATATCCCGTCCTATCAGGTGCGCGCAGGAGATGTGGTCGAGGTAATCGACAAGGCGAAAGCCCATCTGCGCATCAAGGCGTCCGCGGAAGCGACGGCCGCACGTGGATATCCGGAGTGGATCGAAGTCGATGCCAAGGCGCTCAAGGGCACCTACAAGGCTGCGCCGCAACGTTCGGAACTGCCGTCGACCATCAATGAGTCGCTGGTCGTCGAGTTGTACTCCAAATAA
PROTEIN sequence
Length: 210
MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLREKQKIRRIYGVLEGQFRLTYKRAEGRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQVVRHNGINVNGRRVNIPSYQVRAGDVVEVIDKAKAHLRIKASAEATAARGYPEWIEVDAKALKGTYKAAPQRSELPSTINESLVVELYSK*