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SCNpilot_BF_INOC_scaffold_2665_9

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(7212..9044)

Top 3 Functional Annotations

Value Algorithm Source
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] id=12494664 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 611.0
  • Bit_score: 1230
  • Evalue 0.0
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 615.0
  • Bit_score: 890
  • Evalue 2.30e-256
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 615.0
  • Bit_score: 890
  • Evalue 1.20e-255

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1833
ATGCTCAAAACCATCGTCCCCGCCCGCCTCGAATTCAGGCACGGCGTGCCGTATTCCGCCGCCTACGGCGATGTCTACCATTCTGCGGACGGCGGCACGGGTCAGGCACGTCATGTATTTTTGCAGGGCTGTGGATTGCCGCAGACCTGGGCACATCGTGAACGCTGCACGGTGCTGGAAACGGGATTCGGTACGGGGCTGAATTTCCTGGCGACCTGGGCGGCCTGGCGCGACGATCCGGCGCGTTGTGCGCGGCTGCATTTTCTGTCGGTCGAGAAACACCCGTTTCAGGTTGAGGATCTGGCGCAGCTGCATGGGCAATGGCCGGAATTCGCGCCATTATCGGAGGAACTGCTGGCGAACTGGCCGATGCTGACGCCGGGTTTCCACCGCATCGCGCTCGACGGCGGGCGGGTGCAGCTCACCCTGATGCTTGGCGATGCGCTCGACTGCCTGCCGCAGTTGCACGCCAGCGTGGATGCCTTGTATCTCGACGGTTTCGCGCCCGACCGCAATGCCGATCTGTGGCAGCCGGCACTGTTCGACGCGCTGGCGCCATTGGTCCGCCCCGGCGCGATGGCCGCGACCTACACCGTGGCGGCGTCGGTACGCGAAAACCTGGGACGGATCGGTTTCGTCTGCGAAAAGCGGGCGGGCTACGGCCGCAAACGGCATTGCCTGAGCGCCTGTTTCCAGGGGGCTAGCGGCCAGGCCGGGCCCACGGTGCCGCGCCATGTTGCGGTCGTCGGCGCCGGCGTGGCGGGCGCTGCCGTGGCGCATGCCCTGGCGCGGCGCGGCACGGCGGTCACGGTGCTGGAGCGTGCCGCTTTACCGGCGCAGGCGGCCTCGGGCAACCCGGTGGCGGTATTCCGGCCGCTGATCTCGCGCGACGACAACCCGTCTGCCCGCCTGACGCGGGCGGCATTCCTGCACGACCTGCGCGCCTGGGCCGGACTGGGCGAATCCGTGGAATGGGCACGTTGCGGCGTGTTGCATCTGGCGAAGGATGCGGAGGCCGTCGCCAGACTGCGGCAGGGGCTAAGCGCCACCGCGCCGCCGGCCGGTTATGCGCACTGGGTGGATCTGGATGCGGCGCGCGAACTGGCGAACTGGCCCGTCGCGATGCCCGGCGTGTATTTCCCCGCGGCGGGCTGGGTGGTGCCGGAGAGCCTGTGCCGGGCCTGGCTCGATCATCCCGCTATTCGCGTACAGACCGGTTGTGCCGTGACGCGGGTCGAGGCCGGGGCAGCGGGGTGGCAAGTCGTGAATCAGGCGGGCGCGATCGTGGCCGAGGCCGAGGCCGTGGTGCTGGCGAACGCGCGCGACGCCCTCGGCCTGGCGCCCGGACAGCGCTGGCCGCTCCATACCGTGCGCGGCCAGATCACGTGCCTGCCGCCCGGCAGCCTGCCGGAGATCCGGCGGGTGATTGCGCGTGAAGGCTATGTGGCGCCGGGCACCCTGAAGGGCACAAGCGCACGACCGCTGGTGGGGGCCACGTATGAACATGACGACGACGAGACGGCGCCGCGCACGGCAAGCGATCTCGCCAACCTGGCCCGGCTGGAGGCGATTCTGCCAGGTGCGGGCGAGCGGCTGGCGGGCGAAGTGAACGGTCGCGCCTCGTTGCGCGCCACCCTGCCTGACCGGCTGCCGCTGGTGGGCGCGGTCGGCGGGCAGACGGGCCTGTATGTCGCCGCAGGCTATGCCTCGCGCGGGGTCGTGTGGGCGGGGATATTGGGCGAGGCGCTGGCCGACCGGATGACAGGCCAGCCCTGGCCGCTGGAAACCGGATTGATGCAGGCGATCGCGCCGGAGCGGTTCTGTCGGCCGTAG
PROTEIN sequence
Length: 611
MLKTIVPARLEFRHGVPYSAAYGDVYHSADGGTGQARHVFLQGCGLPQTWAHRERCTVLETGFGTGLNFLATWAAWRDDPARCARLHFLSVEKHPFQVEDLAQLHGQWPEFAPLSEELLANWPMLTPGFHRIALDGGRVQLTLMLGDALDCLPQLHASVDALYLDGFAPDRNADLWQPALFDALAPLVRPGAMAATYTVAASVRENLGRIGFVCEKRAGYGRKRHCLSACFQGASGQAGPTVPRHVAVVGAGVAGAAVAHALARRGTAVTVLERAALPAQAASGNPVAVFRPLISRDDNPSARLTRAAFLHDLRAWAGLGESVEWARCGVLHLAKDAEAVARLRQGLSATAPPAGYAHWVDLDAARELANWPVAMPGVYFPAAGWVVPESLCRAWLDHPAIRVQTGCAVTRVEAGAAGWQVVNQAGAIVAEAEAVVLANARDALGLAPGQRWPLHTVRGQITCLPPGSLPEIRRVIAREGYVAPGTLKGTSARPLVGATYEHDDDETAPRTASDLANLARLEAILPGAGERLAGEVNGRASLRATLPDRLPLVGAVGGQTGLYVAAGYASRGVVWAGILGEALADRMTGQPWPLETGLMQAIAPERFCRP*