ggKbase home page

SCNpilot_BF_INOC_scaffold_2665

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2665_1
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..1383)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UK4_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70549.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
SCNpilot_BF_INOC_scaffold_2665_2
unknown

Not on your lists

comp(1444..1713)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2665_3
unknown

Not on your lists

comp(1732..2064)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2665_4
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2402..4027)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKV2_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM36280.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_BF_INOC_scaffold_2665_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4024..4863)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPP4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44983.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_2665_6
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4875..5111)
DNA (237bp) protein (79aa)
DNA-binding protein, excisionase family n=1 Tax=Methylomicrobium album BG8 RepID=H8GLQ4_METAL
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXI84590.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. B
hypothetical protein
SCNpilot_BF_INOC_scaffold_2665_7
unknown

Not on your lists

comp(5216..5590)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2665_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5587..6834)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003702682
Site-specific tyrosine recombinase XerC {ECO:0000313|EMBL:EXI84702.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
recombinase XerD
SCNpilot_BF_INOC_scaffold_2665_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7212..9044)
DNA (1833bp) protein (611aa)
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] id=12494664 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011
SCNpilot_BF_INOC_scaffold_2665_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9229..9537)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743809
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97597.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_2665_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9861..10766
DNA (906bp) protein (302aa)
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] id=12494662 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.
ada; methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63)
SCNpilot_BF_INOC_scaffold_2665_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10874..11809)
DNA (936bp) protein (312aa)
heterodisulfide reductase, B subunit (EC:1.8.98.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] id=12494661 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heterodisulfide reductase, B subunit (EC:1.8.98.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heterodisulfide reductase, B subunit (EC:1.8.98.1)
SCNpilot_BF_INOC_scaffold_2665_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11820..12230)
DNA (411bp) protein (137aa)
heterodisulfide reductase subunit C (EC:1.8.98.1); K03390 heterodisulfide reductase subunit C [EC:1.8.98.1] id=12494660 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heterodisulfide reductase subunit C (EC:1.8.98.1); K03390 heterodisulfide reductase subunit C [EC:1.8.98.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heterodisulfide reductase subunit C (EC:1.8.98.1)
Displaying 13 items

View Taxonomy