ggKbase home page

SCNpilot_BF_INOC_scaffold_2666_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 4035..6059

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=1 Tax=Thiobacillus thioparus RepID=UPI00037135CB similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 402.0
  • Bit_score: 745
  • Evalue 4.70e-212
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 402.0
  • Bit_score: 727
  • Evalue 1.40e-206
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 402.0
  • Bit_score: 702
  • Evalue 9.90e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2025
ATGGCAACAGCGGCAAAGGCAGTCAAGGCCCCGACCTTCCTGTGGGAAGGCATGGACAAACGCGGCAAGAAGGTCAAGGGACAGATGCAGGCCGGCGGCGAGGCGGTGGTCAATTCCCAGCTGCGCAAGCAGGGTATCACCGTCACCAAGGTGAAGAAGCAGAGCACCCTGTTCAGCGGCGCCAAGAAAATCACCGACAAGGATGTCACGCTGTTCACCCGCCAGTTGGCGACGATGATGAAGGCCGGCGTCCCTTTGCTGCAATCCTTTGAAATCGTGGCGCGCGGCCATTCCAATCCCTCGATGCAGCGCCTGTTGCTGGAAATCAAGGCGGACATCGAAAAGGGCAGCAGCCTGACCCAGGCATTCGGGCGTCATCCGCTGCATTTCGACGCGCTGTTCTGCAACCTGGTCGGGGCGGGGGAGTCCGCCGGTATTCTCGACGGCGTGCTCGAACGGCTGGCGGTCTACAAGGAAAAGATCCTTGCCATCAAGAGCAAGATCAAGTCGGCGCTGTTCTACCCGATCTCCATCATTGTGGTGGCGTTCGTCATCACCGCCATCATCATGATTTTCGTGATCCCGGCGTTCAAGGAATTGTTCAGCAGCTTTGGCGCGGATCTGCCGGGGCCGACCCTGGTGATCATGGCGCTCTCGGATTTCTTCGTCAAATGGTGGTGGGCGATTTTCGGTATCATCGGCGGCGGGATCTTCGCCCTGCTGCAGGCCTGGAAGCGTTCGCGCAAGGTGCAGATGTTCATGGACCGCCTCATGCTCAAGCTGCCGATTTTCGGCCCGGTGATTGAAAAAGCCACGATTGCGCGCTGGACCCGTACGCTGGCGACCATGTTCGCCGCCGGCGTGCCGCTGGTCGAGGCGCTGGAATCGGTGGGCGGGGCGTCGGGCAACCAGGTCTTCGTCGAGGCCACCAGCAAGATCCGCGGCGAAGTGGCGACCGGCACGGCGCTGACCGTGGCGATGCAGAACTCGGGGAAGTTTCCCAACATGGTGCTGCAGATGGCGGCCATCGGCGAGGAATCCGGTTCGCTCGACTCCATGCTGGGCAAGGTGGCCGATTTCTACGAAGCGGAAGTCGATGACGCGGTCGAGGCGCTCTCCAGCCTGATGGAGCCGATCATCATGGTGGTGCTGGGCACCCTTATCGGCGGCATGGTGATCGCCATGTATCTGCCGATTTTCAAGATGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGTCATCCACCGGCTGCCCAAAATGATGGAAGCCGAATGGCAGGCGCAATGCGCCGAACTGCGCGGCGAAACCGCGCCCGATACGCCGCGCTACAACCTGTGGCTGCCGCGCTCGGCCTGTCCCCAGTGCGGGCACCAGATCACCGCACTGGAAAACATCCCGCTGCTGTCGTGGCTGTGGCTGCGCGGACGCTGTTCGGCCTGCGGCACGTCGATCGGCGCGCGCTACCCGCTGGTGGAGTTGCTCACCGCGCTGCTGTCGGCGGCGGTTGCCTGGAAATGGGGCGTCAGCGTGCAAACCGCGGGCGCGCTGCTGCTGGGATGGACACTGATCGCGCTGGCGTTCATTGACTTCGATACCACCCTGCTGCCCGACAGCCTGACCCTGCCGCTCATCTGGCTGGGCTTGATCTTCAACGTGTATGGGGTTTTTGCCAGCCTTCCCGATGCGGTCGTCGGTGCCGTGGCGGGCTATCTGGTACTGTGGTCGGTGTACTGGCTGTTCAGGCTCGCAACCGGCAAGGAGGGCATGGGATTCGGCGATTTCAAGTTGCTGGCGGCCATCGGTGCCTGGCTCGGCTGGCAGATGCTGCCCGTGACGTTGCTGCTGTCGTCGGGAGTCGGTGCGGTAATCGGGATTGCGCTGATCGTGCTGGTGAAACATGATCGTCGCGTGCCGATTCCGTTTGGCCCGTATCTGGCGGGGGGAGGGCTGGCGGCGCTGTTTTTCGGTGCCGACCTGACGCAGGCCTACCTGGCCCAATTCTGA
PROTEIN sequence
Length: 675
MATAAKAVKAPTFLWEGMDKRGKKVKGQMQAGGEAVVNSQLRKQGITVTKVKKQSTLFSGAKKITDKDVTLFTRQLATMMKAGVPLLQSFEIVARGHSNPSMQRLLLEIKADIEKGSSLTQAFGRHPLHFDALFCNLVGAGESAGILDGVLERLAVYKEKILAIKSKIKSALFYPISIIVVAFVITAIIMIFVIPAFKELFSSFGADLPGPTLVIMALSDFFVKWWWAIFGIIGGGIFALLQAWKRSRKVQMFMDRLMLKLPIFGPVIEKATIARWTRTLATMFAAGVPLVEALESVGGASGNQVFVEATSKIRGEVATGTALTVAMQNSGKFPNMVLQMAAIGEESGSLDSMLGKVADFYEAEVDDAVEALSSLMEPIIMVVLGTLIGGMVIAMYLPIFKMXXXXXXXXXXXXXXXXVVIHRLPKMMEAEWQAQCAELRGETAPDTPRYNLWLPRSACPQCGHQITALENIPLLSWLWLRGRCSACGTSIGARYPLVELLTALLSAAVAWKWGVSVQTAGALLLGWTLIALAFIDFDTTLLPDSLTLPLIWLGLIFNVYGVFASLPDAVVGAVAGYLVLWSVYWLFRLATGKEGMGFGDFKLLAAIGAWLGWQMLPVTLLLSSGVGAVIGIALIVLVKHDRRVPIPFGPYLAGGGLAALFFGADLTQAYLAQF*