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SCNpilot_BF_INOC_scaffold_2666

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2666_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112..897
DNA (786bp) protein (262aa)
transmembrane protein id=12493280 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_2666_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

909..2207
DNA (1299bp) protein (433aa)
transmembrane protein id=12493281 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_2666_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2307..4022
DNA (1716bp) protein (572aa)
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB id=12493282 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
type IV pilus assembly protein, PilB
SCNpilot_BF_INOC_scaffold_2666_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4035..6059
DNA (2025bp) protein (675aa)
type II secretion system protein F n=1 Tax=Thiobacillus thioparus RepID=UPI00037135CB
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated
type IV pilus assembly protein PilC
SCNpilot_BF_INOC_scaffold_2666_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6059..6667
DNA (609bp) protein (203aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] id=12493285 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dephospho-CoA kinase (EC:2.7.1.24)
SCNpilot_BF_INOC_scaffold_2666_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6720..7475
DNA (756bp) protein (252aa)
hypothetical protein id=12493286 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2666_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7673..8314)
DNA (642bp) protein (214aa)
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6)
id=12493288 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2666_8
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8416..9636)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037659D5
Uncharacterized protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
SCNpilot_BF_INOC_scaffold_2666_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10114..11883
DNA (1770bp) protein (590aa)
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] id=12493290 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SLT domain-containing protein
SCNpilot_BF_INOC_scaffold_2666_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11928..12965
DNA (1038bp) protein (346aa)
nucleoside-diphosphate-sugar epimerase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] id=12493291 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:AAZ98314.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source
SCNpilot_BF_INOC_scaffold_2666_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12982..14199
DNA (1218bp) protein (406aa)
metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] id=12493292 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_2666_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14350..15096
DNA (747bp) protein (249aa)
ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] id=12493293 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ferredoxin-NADP reductase
SCNpilot_BF_INOC_scaffold_2666_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15141..17021
DNA (1881bp) protein (627aa)
kup3; potassium transporter; K03549 KUP system potassium uptake protein id=12493294 bin=THIO_HI species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
kup; potassium transport system protein kup; K03549 KUP system potassium uptake protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
kup3; potassium transporter
SCNpilot_BF_INOC_scaffold_2666_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17052..17423)
DNA (372bp) protein (124aa)
hypothetical protein id=12493295 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2666_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17467..18054)
DNA (588bp) protein (196aa)
putative outer membrane lipoprotein id=12493296 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative outer membrane lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
outer membrane lipoprotein
SCNpilot_BF_INOC_scaffold_2666_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18108..18341)
DNA (234bp) protein (78aa)
hypothetical protein id=12493297 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2666_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18512..19258
DNA (747bp) protein (249aa)
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=12493298 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Thiobacillus_62_9_curated
two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_2666_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19255..20541
DNA (1287bp) protein (429aa)
periplasmic sensor signal transduction histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] id=12493299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curat
periplasmic sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_2666_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20701..20853)
DNA (153bp) protein (51aa)
hypothetical protein id=12493301 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2666_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21127..22518
DNA (1392bp) protein (464aa)
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 id=12493302 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATPase
Displaying 20 items

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