ggKbase home page

SCNpilot_BF_INOC_scaffold_2773_11

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(12709..13620)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator id=12493166 bin=THIO_HI species=Halomonas anticariensis genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 304.0
  • Bit_score: 607
  • Evalue 6.90e-171
LysR family transcriptional regulator {ECO:0000313|EMBL:EPC00843.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halom similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 303.0
  • Bit_score: 501
  • Evalue 9.80e-139
gcvA; glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 301.0
  • Bit_score: 500
  • Evalue 3.30e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halomonas anticariensis → Halomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAAACCCCTGTCCACCTGAACGCCTTGCGGGCATTCGAAGCCAGCGCCCGTCATCGGAGCTTTTCCGCGGCGGCGGCCGAACTGAACGTGACGCCGGCAGCCGTCGGCCAGCTCGTGCGTGCGCTGGAAGAATGGTTGGGCACGCCGTTGTTCCACCGCGGCAACAGTGGACGGGCCAGGCTCGTCGCCACCGACGCGGCGCAACGCGCCTTGCCCGACATTCGGGCAGGCTTCGACAGCTTGAGTCTGGGGCTGGAACGGCTCAAGGAAGGGGCGACCGGCGGCGTGCTGACCGTAACGGTCAGCCCGGCCTTCGCCGCCAAGTGGCTGCTGCCACGCATCGAACGCTTCCAGGCCGCATGGCCCGATACCGACATCCGCCTGGACACGAACCACAAGCCCGTGGATTTCGTGGCGCAGCGGGTGGATATCGGCGTGCGCTACGGCATGGGGGACTGGCCGGGGCTGGTTGCGGAAAAGCTGATGGACGAGGAAATCTATCCAGTGTGTTCGCCGGCATTGCCGCGTCGGTATCGACGACTGCGCAAACCGGGCGACCTGATACGGGAAACCCTGATCCATGATCTGTCGATGGACGGCCACACGGGTTTTCCTTCGTGGGACGCCTGGTTCCAGAAAGCCGGCGTGACCGGCGCAGGCGCCCTGCGTGGCATGAAGATCAACAATTCCGCAGCGGTCTTGCAGGCGGCGATCGAAGGTCACGGCATCGCGCTCGCCCGCAGCGTGATGGCGCGCGACGATCTGGCCGCAGGCCGCTTGGTGCGGCTGTTTCCCGGGATCGCCTGCACGTCGGCGCTGGCCTACTACGTGGTCTACCGCGCCGAGTGTTCCAGCTTGCCGCGCCTGGTCGCATTTCGGGATTGGCTGCTCAAGGAAGCTGCCACATAG
PROTEIN sequence
Length: 304
MKTPVHLNALRAFEASARHRSFSAAAAELNVTPAAVGQLVRALEEWLGTPLFHRGNSGRARLVATDAAQRALPDIRAGFDSLSLGLERLKEGATGGVLTVTVSPAFAAKWLLPRIERFQAAWPDTDIRLDTNHKPVDFVAQRVDIGVRYGMGDWPGLVAEKLMDEEIYPVCSPALPRRYRRLRKPGDLIRETLIHDLSMDGHTGFPSWDAWFQKAGVTGAGALRGMKINNSAAVLQAAIEGHGIALARSVMARDDLAAGRLVRLFPGIACTSALAYYVVYRAECSSLPRLVAFRDWLLKEAAT*