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SCNpilot_BF_INOC_scaffold_2773

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2773_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1088)
-----------------
DNA (1086bp)
protein (362aa)
putative long-chain fatty acid transport protein id=12493176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative long-chain fatty acid transport protein Tax=GWE1_Thiobacillus_62_9_curated
long-chain fatty acid transport protein
SCNpilot_BF_INOC_scaffold_2773_2
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1196..1951)
-----------------
DNA (756bp)
protein (252aa)
putative circadian phase modifier CpmA-like protein; K06898 id=12493175 bin=THIO_HI species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative circadian phase modifier CpmA-like protein
Putative circadian phase modifier CpmA-like protein {ECO:0000313|EMBL:AIQ89473.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacteri
SCNpilot_BF_INOC_scaffold_2773_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1948..2772)
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein; K06864 uncharacterized protein id=12493174 bin=THIO_HI species=Smaragdicoccus niigatensis genus=Smaragdicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=THIO_HI organism_group=Betaproteobacteria
Pp-loop domain protein {ECO:0000313|EMBL:CDX52995.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurif
protein of unassigned function
SCNpilot_BF_INOC_scaffold_2773_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2769..4097)
-----------------
DNA (1329bp)
protein (443aa)
hypothetical protein id=12493173 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDX20976.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_BF_INOC_scaffold_2773_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4164..4655)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein id=12493172 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDX20012.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_2773_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4769..6547)
-----------------
DNA (1779bp)
protein (593aa)
hypothetical protein id=12493171 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDX20980.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_BF_INOC_scaffold_2773_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6644..7342)
-----------------
DNA (699bp)
protein (233aa)
glutathione S-transferase domain-containing protein id=12493170 bin=THIO_HI species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Glutathione S-transferase domain protein {ECO:0000313|EMBL:CCV06081.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
glutathione S-transferase domain-containing protein
SCNpilot_BF_INOC_scaffold_2773_8
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7942..9672)
-----------------
DNA (1731bp)
protein (577aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00359 NADH oxidase [EC:1.6.-.-] id=12493169 bin=THIO_HI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:KHF25614.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill sym
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_BF_INOC_scaffold_2773_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9854..10816)
-----------------
DNA (963bp)
protein (321aa)
LysR family transcriptional regulator id=12493168 bin=THIO_HI species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABZ72968.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Cauloba
SCNpilot_BF_INOC_scaffold_2773_10
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11290..12624
-----------------
DNA (1335bp)
protein (445aa)
glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2] id=12493167 bin=THIO_HI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutamate--cysteine ligase
Glutamate--cysteine ligase {ECO:0000313|EMBL:AJP48779.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6
SCNpilot_BF_INOC_scaffold_2773_11
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12709..13620)
-----------------
DNA (912bp)
protein (304aa)
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator id=12493166 bin=THIO_HI species=Halomonas anticariensis genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
LysR family transcriptional regulator {ECO:0000313|EMBL:EPC00843.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halom
gcvA; glycine cleavage system transcriptional activator
SCNpilot_BF_INOC_scaffold_2773_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13784..14068
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein id=12493165 bin=THIO_HI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41598.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_BF_INOC_scaffold_2773_13
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14223..15368
-----------------
DNA (1146bp)
protein (382aa)
amine oxidase id=12493164 bin=THIO_HI species=Burkholderia phenoliruptrix genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AFT90198.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix
SCNpilot_BF_INOC_scaffold_2773_14
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15386..16303
-----------------
DNA (918bp)
protein (306aa)
alcohol dehydrogenase id=12493163 bin=THIO_HI species=Burkholderia ambifaria genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABI91985.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholde
Displaying 14 items

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