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SCNpilot_BF_INOC_scaffold_2819_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(512..1222)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12495352 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 467
  • Evalue 8.70e-129
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 236.0
  • Bit_score: 452
  • Evalue 6.20e-125
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 236.0
  • Bit_score: 452
  • Evalue 3.10e-124

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCAGGCAAACCATCGTCGCAAGACGAGCAGATCACCAAGTATGCGCCGCTGGTCAAGCGCATTGCCTATCACATGATGGCGCGCTTGCCCGCCAGTGTCGAAGTGGATGACCTCATCCAGGTCGGACTGATCGGCCTGCTGGATGCGGTCGGGCGCTTCGACGGCACCCAGGGCGCGCAGTTTGAATCCTATGCCACCCAGCGCATCCGCGGCGCCATGCTCGACGAACTGCGCGAGGCCGATTGGCTGCCGCGTCATGTGCGACAGAAATCGCGGCAGATCGAAGCCGCCATCCACCGGCTGGAGCAGCGTCACGGCAAGTCGCCGACCGAACAGGAGATTTCCGCCGAGCTGGGGATGCCGATCGAACAGTATCAATCCATGCTGGGCGATGTGAAGTGTTCACAACTGCTGTATTACGAAGACTTCTCCGACGAGGACAGCGCCAGCTTCCTGGAGCGCTATCTGGTCGACGGCAGCAATGACCCGCTGGCGGTACTCGAGGACGAAGGTTTCCGCGACAGCCTGATCGCCGCGATCCACCACCTGCCGGAACGCGAGCGCAGCATGATGGGCATGTACTACGAACAGGACATGAACCTGAAGGAAATCGGCGCGGTGCTCGGGGTCTCCGAATCGCGCGTATGTCAGTTGCATTCGCAGGCGGTTGCACGCCTGCGCGCCCAGCTCAAGATCTGGAAAGACTGA
PROTEIN sequence
Length: 237
MAGKPSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLLDAVGRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIHRLEQRHGKSPTEQEISAELGMPIEQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDEGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD*