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SCNpilot_BF_INOC_scaffold_2819

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2819_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] id=12495351 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
malate dehydrogenase (EC:1.1.1.40)
SCNpilot_BF_INOC_scaffold_2819_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..1222)
DNA (711bp) protein (237aa)
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12495352 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RNA polymerase sigma-70 factor
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma
SCNpilot_BF_INOC_scaffold_2819_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1270..1632)
DNA (363bp) protein (121aa)
hypothetical protein id=12495353 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2819_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1869..3041)
DNA (1173bp) protein (391aa)
flagellar biosynthetic protein FlhF id=12495354 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flagellar biosynthetic protein FlhF Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flagellar biosynthetic protein FlhF
SCNpilot_BF_INOC_scaffold_2819_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3038..5116)
DNA (2079bp) protein (693aa)
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA id=12495355 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
flagellar biosynthesis protein FlhA
SCNpilot_BF_INOC_scaffold_2819_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5113..5979)
DNA (867bp) protein (289aa)
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB id=12495356 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
flagellar biosynthetic protein FlhB
SCNpilot_BF_INOC_scaffold_2819_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6219..6800
DNA (582bp) protein (194aa)
hypothetical protein id=12495357 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2819_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..7074)
DNA (195bp) protein (65aa)
hypothetical protein id=12495358 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2819_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7076..7363)
DNA (288bp) protein (96aa)
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S id=12495359 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
(2Fe-2S)-binding protein
SCNpilot_BF_INOC_scaffold_2819_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7553..8674)
DNA (1122bp) protein (374aa)
hscA; chaperone protein HscA; K04044 molecular chaperone HscA id=12495360 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hscA; chaperone protein HscA; K04044 molecular chaperone HscA Tax=GWE1_Thiobacillus_62_9_curated
hscA; chaperone protein HscA
SCNpilot_BF_INOC_scaffold_2819_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9358..9885)
DNA (528bp) protein (176aa)
Co-chaperone protein HscB homolog id=1326616 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hscB; co-chaperone HscB; K04082 molecular chaperone HscB Tax=GWE1_Thiobacillus_62_9_curated
hscB; co-chaperone HscB
SCNpilot_BF_INOC_scaffold_2819_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10004..10327)
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein id=12494503 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=GWE1_Thiobacillus_62_9_curated
Iron-sulfur cluster assembly protein IscA
SCNpilot_BF_INOC_scaffold_2819_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10331..10717)
DNA (387bp) protein (129aa)
scaffold protein; K04488 nitrogen fixation protein NifU and related proteins id=12494502 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
scaffold protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scaffold protein
SCNpilot_BF_INOC_scaffold_2819_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10856..10987)
DNA (132bp) protein (44aa)
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cysteine desulfurase n=1 Tax=Thiobacillus thioparus RepID=UPI000363885A
cysteine desulfurase
Displaying 14 items

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