ggKbase home page

SCNpilot_BF_INOC_scaffold_3013_5

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(2127..2699)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA id=12495067 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 2.10e-101
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 183.0
  • Bit_score: 294
  • Evalue 1.50e-76
type II secretory pathway, pseudopilin PulG similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 206.0
  • Bit_score: 206
  • Evalue 6.30e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGTATACCCAGAAGGACATGAAAACCAGGCAGTACGGCTTCACCATGATCGAACTCATCGTCGTCATCGTCATCCTCGGCATCCTCGCCGCCGTGGCGCTGCCGCGCTTCACCAACATCCAGCGCGATGCGCGCATCGCCAAGCTGAATGCGGCACGTGGCGCGGTGCTGGCGGCAGCGGGGATGGTTCACGGAACGGTACTAGTGCGAGGTGGGGTTGCCGATACGGTAACCTGCGCCGGCGGTGGCGGTTTTGCGAACAACTTGACCGGCGCTGCGGGAACCGTGTGTACTGAAAACGGCACCGTCAATCTCGTCAATGGCTATCCCGCTGCTACCGTCGCGGGCATTGTGAGTGCCGCCGGCTTGACCACGGTCATGAACCCGTCAGCCGCACAGCTCGCAGCGGAGGGCTATCAAACCAATGGCGCGGGGCCGATCGATATTCGCGTGATGGGCGGCTCCAACCCCGCTACCTGTTTCTTCCGGTATACGGCAGCGGCAGCTAATGCAGCGCCTGGGGTCGGCTCGCTCACACCCGCCACGCCCACCGGTAACACGGCGGGCTGCTAG
PROTEIN sequence
Length: 191
MYTQKDMKTRQYGFTMIELIVVIVILGILAAVALPRFTNIQRDARIAKLNAARGAVLAAAGMVHGTVLVRGGVADTVTCAGGGGFANNLTGAAGTVCTENGTVNLVNGYPAATVAGIVSAAGLTTVMNPSAAQLAAEGYQTNGAGPIDIRVMGGSNPATCFFRYTAAAANAAPGVGSLTPATPTGNTAGC*