ggKbase home page

SCNpilot_BF_INOC_scaffold_3013_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(2819..3964)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory pathway component PulF; K12278 MSHA biogenesis protein MshG id=12495068 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 325.0
  • Bit_score: 515
  • Evalue 4.50e-143
type II secretory pathway component PulF similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 409.0
  • Bit_score: 451
  • Evalue 1.70e-124
Type II secretory pathway component PulF {ECO:0000313|EMBL:AAZ96706.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 409.0
  • Bit_score: 451
  • Evalue 8.50e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGCTGCGTTTCGCCTATACCGGCCGCACCCGGAGCGGCGAGCAAGCCCAGGGCATCCTGGAGGCGGACAACGCCGCCGCATGCGCCAGCAGCCTGCTGAAAAACGGCATTTCACCCGTGACCATCCAGGAAACCGGGCAATCCGAGCGGCGCGGGGCGAAACCAAAAAGTCTGAGTCTGTTCGAGCCCGCCGTCCGGCCCATCGACGTGCAGCTGTTCTCGCGCCAGCTCTATACCCTGATGCGCGCCGGCGTGCCCATCCTGCGATCGCTGTCGGGCCTGCTCGAATCGACCACCAATGCCGCCTTTGCCCGGGTGATCGCGTCCCTGAAGGAGTCGCTCGAAGCGGGACGCGACCTGTCGATGGCGATGCGCCAGCATCCCGCGGTCTTTTCGCCGTTTTACGTGGCGATGGTGCGGGTCGGCGAGGCAACCGGCCGCCTGGACGAAATCTTCCTGCGCATGTTCGAGCACCTCGAGTTCGAACGCGAGACCCGCGCCCGCATCAAGGAGGCGCTGCGTTATCCGACCTTCGTGCTCGTCGCCATGGTGGTTGCGATCGCCGTCATCAACGTGTTCGTCATTCCCGCTTTTGCCAAGGTCTATGCCGGTCTTGGGGCCGAGTTGCCGCTGATGACGCGCATTCTCATCGAGACCTCGCGCCTGACCATCGCCTATGGCTGGCTCATGCTGGCGGGCCTGGTGCTGACCGTCTTCGGATTCCGCATGTGGCGCGCCACCCCCGGCGGGCGCCTGCTGTGGGACCGCTTCAAGCTCAGGCTGCCGCTCACCGGCTCGATCTCGGTGGTGGCGGAAGTCACCGACAACGCCTGGATCGCCTCGCGCGTCGAGCAGATGCGCAACGGCATCGAGCGCGGCGAATCGGTCCTGCGCACCGCCCAGAACGCGGCCGTGTTCAACCCGGTGGTGCTGCAGATGATCGCCGTCGGCGAGGAAACCGGCAGCATCGACGACCTCATGCAGGAAGTCGCCGGGATGTACGAGCGCGAGGTGGGCTACGAGATCAAGACGCTCGCCGCCCGCATCGAGCCGCTGATCATCGTTGCCCTGGGCGGCGTCGTGCTGGTGCTGGCGCTCGGCGTGTTCCTGCCGATGTGGGATCTGGCCAGCGTGGCCATCAAGTGA
PROTEIN sequence
Length: 382
MLRFAYTGRTRSGEQAQGILEADNAAACASSLLKNGISPVTIQETGQSERRGAKPKSLSLFEPAVRPIDVQLFSRQLYTLMRAGVPILRSLSGLLESTTNAAFARVIASLKESLEAGRDLSMAMRQHPAVFSPFYVAMVRVGEATGRLDEIFLRMFEHLEFERETRARIKEALRYPTFVLVAMVVAIAVINVFVIPAFAKVYAGLGAELPLMTRILIETSRLTIAYGWLMLAGLVLTVFGFRMWRATPGGRLLWDRFKLRLPLTGSISVVAEVTDNAWIASRVEQMRNGIERGESVLRTAQNAAVFNPVVLQMIAVGEETGSIDDLMQEVAGMYEREVGYEIKTLAARIEPLIIVALGGVVLVLALGVFLPMWDLASVAIK*