ggKbase home page

SCNpilot_BF_INOC_scaffold_3397_5

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(3774..4211)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] id=12493631 bin=THIO_HI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 311
  • Evalue 4.90e-82
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 144.0
  • Bit_score: 258
  • Evalue 1.10e-66
Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ADZ27728.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ADZ27728.1};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitro similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 144.0
  • Bit_score: 258
  • Evalue 5.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosomonas sp. AL212 → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGATGACCAATCCAGGCAATCGCCTCACCCAGGGCCAGTTTTCATTCATGCCCGATCTCACCGACAAGGAGATCACCGCGCAGATCAAATATGCGCTGGGCAACGGCTGGGCCGTCAACGTCGAATACACCGACGACCCGCATCCGCGCAATACCTATTGGGAGATGTTCGGCATGCCGATGTTCGACCTCAAGGATCCGGCCGGGATCCTGATGGAGGTCAACAACTGCCGCAAGACCTTTCCCGGCTGCTACATTCGCGTCACCGCGTTCGACAGTTCGCGCGGCGTCGAATCGCCGCGGATGTCCTACATCGTCAACCGGCCGAAGAAGGAGCCCGGCTTCCGTCTGACGCGGCAGGAAGGCGCCGGTCGTACCGTCCACTACACCGTGCATTCCTACGCGACGGACCGGCCGGAAGGCGAACGCTACACTTGA
PROTEIN sequence
Length: 146
MMTNPGNRLTQGQFSFMPDLTDKEITAQIKYALGNGWAVNVEYTDDPHPRNTYWEMFGMPMFDLKDPAGILMEVNNCRKTFPGCYIRVTAFDSSRGVESPRMSYIVNRPKKEPGFRLTRQEGAGRTVHYTVHSYATDRPEGERYT*