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SCNpilot_BF_INOC_scaffold_3397

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3397_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1043)
DNA (1041bp) protein (347aa)
aminotransferase (EC:2.6.1.-); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aminotransferase (EC:2.6.1.-)
adenosylmethionine--8-amino-7-oxononanoate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003622E94
SCNpilot_BF_INOC_scaffold_3397_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(998..1666)
DNA (669bp) protein (223aa)
aminotransferase (EC:2.6.1.-); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
aminotransferase (EC:2.6.1.-)
adenosylmethionine--8-amino-7-oxononanoate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000361AD1C
SCNpilot_BF_INOC_scaffold_3397_3
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2186..3139)
DNA (954bp) protein (318aa)
CbbX protein id=12493629 bin=THIO_HI species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CbbX protein
CbbX protein {ECO:0000313|EMBL:ADJ29540.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-1
SCNpilot_BF_INOC_scaffold_3397_4
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3154..3708)
DNA (555bp) protein (185aa)
putative protease; K03152 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis id=12493630 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_HI organism_group=Betaproteobacteria
DJ-1 family protein
DJ-1 family protein {ECO:0000313|EMBL:BAP89981.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCNpilot_BF_INOC_scaffold_3397_5
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3774..4211)
DNA (438bp) protein (146aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] id=12493631 bin=THIO_HI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ADZ27728.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ADZ27728.1};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitro
SCNpilot_BF_INOC_scaffold_3397_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4246..5721)
DNA (1476bp) protein (492aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12493632 bin=THIO_HI species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=4
SCNpilot_BF_INOC_scaffold_3397_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5896..6798
DNA (903bp) protein (301aa)
LysR family transcriptional regulator id=12493633 bin=THIO_HI species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:CCU61628.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_3397_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6916..7932)
DNA (1017bp) protein (339aa)
cbbO2; rubisco activation protein CbbO id=12493634 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cbbO2; rubisco activation protein CbbO Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbO2; rubisco activation protein cbbO
Displaying 8 items

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