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SCNpilot_BF_INOC_scaffold_3789_7

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(7612..8871)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 8.80e-231
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12495252 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 420.0
  • Bit_score: 818
  • Evalue 3.60e-234
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 1.80e-231

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGCATCTTTCCGAACTCAAGCAGAAACCCATCACCGAGCTTCTCGAAATCGCCGCGGCCAGCGGGATCGACAACGCCAACCGTTTTCGCAAACAGGAACTGATCTTCACCATCCTGAAGACGCTGGCCAAGCGCGGCGAAAGCATCTACGGCGATGGGGTGCTGGAAGTGCTGCCGGATGGCTTCGGATTCCTGCGCTCGCCGGAGTCCTCGTATCTCGCCAACACCGACGACATCTATGTGTCGCCCTCGCAGATCCGCCGCTTCAACCTGCACACCGGCGACAAGATCGAAGGTGAGATCCGCACCCCCAAGGACGGCGAACGCTATTCGGCGATGACCAAGCTCGACCTGATCAACGGCGAGCCGCCCGAAGCCAGCAAGAACAAGATCCTGTTCGAGAACCTGACCCCGCTGCACCCGGACAAGCCGCTCAAGCTGGAGCGCGACATCAAGGCCGAGGAAAACATCACCAGCCGCGTCATCGACATCGTCGCGCCCATCGGCAAAGGCCAGCGCGGCTTGCTGGTGGCGCCGCCGAAGTCCGGCAAGACGGTGATGCTGCAGCACATCGCCCACGCCATCACCTCCAACCATCCCGACGTCGTGCTGTTCGTGCTGCTGATCGACGAGCGCCCGGAAGAAGTCACCGAGATGAGCCGCACCGTGCGTGGTGAAGTCGTGGCGTCCACCTTCGACGAACCCGCCAGCCGCCACGTCCAGGTCGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGACTCGATCACCCGTCTGGCGCGTGCCTACAACACCGTGCAGCCGGCTTCCGGCAAGGTGCTCACCGGCGGCGTCGACGCCAACGCGCTGCAGAAGCCCAAGCGCTTCTTCGGTGCCGCGCGCAACATCGAGGAAGGCGGCAGCCTCACCATCCTCGCCACCACGCTGGTCGATACCGGCAGCCGCATGGACGACGTGATCTACGAGGAATTCAAGGGCACCGGCAACCTGGAAATCCACCTCGACCGCAAGATGGCCGAGAAGCGCCAGTATCCGGCGATCAACGTCAACCGTTCCGGCACCCGCCGCGAAGAACTGCTGATGCCGCACGACATCCTGCAAAAGGTATGGGTGCTGAGGAAGCTGCTCTACCCGATGGACGACATGGAAGCGATGGAGTTTCTGCTCGACAAGATCCGCGCGACGAAGAACAACAACGAGTTCTTCGATTCGATGCGTCGGGGATGA
PROTEIN sequence
Length: 420
MHLSELKQKPITELLEIAAASGIDNANRFRKQELIFTILKTLAKRGESIYGDGVLEVLPDGFGFLRSPESSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLERDIKAEENITSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITSNHPDVVLFVLLIDERPEEVTEMSRTVRGEVVASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTILATTLVDTGSRMDDVIYEEFKGTGNLEIHLDRKMAEKRQYPAINVNRSGTRREELLMPHDILQKVWVLRKLLYPMDDMEAMEFLLDKIRATKNNNEFFDSMRRG*