ggKbase home page

SCNpilot_BF_INOC_scaffold_3789

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3789_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20..2035)
DNA (2016bp) protein (672aa)
putative TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12495245 bin=THIO_HI species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative TonB-dependent receptor
Putative TonB-dependent receptor {ECO:0000313|EMBL:BAL95426.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strai
SCNpilot_BF_INOC_scaffold_3789_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2885..3634
DNA (750bp) protein (250aa)
hypothetical protein id=12495247 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3789_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3631..4242)
DNA (612bp) protein (204aa)
molybdenum cofactor guanylyltransferase; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] id=12495248 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
molybdenum cofactor guanylyltransferase; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
molybdenum cofactor guanylyltransferase
SCNpilot_BF_INOC_scaffold_3789_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..5749)
DNA (1563bp) protein (521aa)
hypothetical protein id=12495249 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3789_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5739..7193)
DNA (1455bp) protein (485aa)
hypothetical protein id=12495250 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3789_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7309..7515)
DNA (207bp) protein (69aa)
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=12495251 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpmE; 50S ribosomal protein L31
SCNpilot_BF_INOC_scaffold_3789_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7612..8871)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 specie
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12495252 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rho; transcription termination factor Rho
SCNpilot_BF_INOC_scaffold_3789_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8979..9305)
DNA (327bp) protein (109aa)
thioredoxin; K03671 thioredoxin 1 id=12495253 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thioredoxin; K03671 thioredoxin 1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin
SCNpilot_BF_INOC_scaffold_3789_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9466..9789
DNA (324bp) protein (108aa)
7Fe ferredoxin; K05524 ferredoxin id=12495254 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
7Fe ferredoxin; K05524 ferredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
7Fe ferredoxin
SCNpilot_BF_INOC_scaffold_3789_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9795..12521
DNA (2727bp) protein (909aa)
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] id=12495255 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5)
SCNpilot_BF_INOC_scaffold_3789_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12579..12815
DNA (237bp) protein (79aa)
SpoVT/AbrB domain-containing protein; K07172 antitoxin id=12495256 bin=THIO_HI species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SpoVT/AbrB domain-containing protein; K07172 antitoxin Tax=RBG_16_Betaproteobacteria_58_11_curated
SpoVT/AbrB domain-containing protein
SCNpilot_BF_INOC_scaffold_3789_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12803..13117
DNA (315bp) protein (105aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-] id=12495257 bin=THIO_HI species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Growth inhibitor PemK {ECO:0000313|EMBL:GAO35314.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T0
transcriptional modulator of MazE/toxin, MazF
SCNpilot_BF_INOC_scaffold_3789_13
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13185..15254
DNA (2070bp) protein (690aa)
Cytosine-specific methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] id=12495258 bin=THIO_HI species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417, ECO:0000313|EMBL:CDS52875.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betapro
Cytosine-specific methyltransferase (EC:2.1.1.37)
SCNpilot_BF_INOC_scaffold_3789_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15652..16086
DNA (435bp) protein (145aa)
hypothetical protein id=12495259 bin=THIO_HI species=Asticcacaulis excentricus genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48908.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_3789_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16229..18271
DNA (2043bp) protein (681aa)
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF2E7
Displaying 15 items

View Taxonomy