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SCNpilot_BF_INOC_scaffold_4041_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(673..936)

Top 3 Functional Annotations

Value Algorithm Source
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=12494407 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 176
  • Evalue 8.70e-42
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 5.10e-40
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 87.0
  • Bit_score: 164
  • Evalue 1.60e-38

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCACACAAGAAAGCAGGCGGCAGTTCGCGTAACGGTCGCGATTCGGAATCGAAACGTCTGGGCGTGAAGCGCTACGGTGGCGAACTGGTTCTGGCTGGCAACATCATCGTGCGTCAGCGCGGCACCCAGTTCCATCCGGGCGACAACGTCGGCATCGGCAAGGACCACACCCTGTTCGCCAAGGCGAACGGCACGGTCAAGTTCGAGATCAAGGGCGCCGCCCGCCGCCACGTGGTTCGTATCGAGCCGGTTGCGGCCTGA
PROTEIN sequence
Length: 88
MAHKKAGGSSRNGRDSESKRLGVKRYGGELVLAGNIIVRQRGTQFHPGDNVGIGKDHTLFAKANGTVKFEIKGAARRHVVRIEPVAA*