ggKbase home page

SCNpilot_BF_INOC_scaffold_5982_7

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(4171..4872)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=12493106 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 459
  • Evalue 2.30e-126
transmembrane protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 233.0
  • Bit_score: 397
  • Evalue 1.20e-107
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 233.0
  • Bit_score: 373
  • Evalue 3.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGGCCACCCTCTACCTGATCCCGGTTCCGCTGGGGCCGGTCAGCCCCGAAGCCTGCCTGCCGCCCGACACGCTCGCGGTCGCGCGCCGACTCGACCATTTCGTTGTCGAACGCGCCAAGACCGCGCGCGCCCATCTCAAAGCGATGGGCCACCCGCTGCCCATTCAGTCGCTGAACATCGAGGAGTTGAACGAACACACCCCGGCAGCGGCCATTGCCGCGCTGCTGGCACCGCTGAAGGCAGGTCACGACGTCGGCCTGCTGTCGGAAGCGGGCTGTCCGGCAGTGGCCGACCCCGGCGCGGCGCTGGTCATGGCCGCGCATCACGAGAACATTCCGGTCATCCCGCTGATCGGCCCATCGTCTATTTTGCTGGCACTGATGGCCTCGGGCCTCGGCGGGCAGCGCTTCGCTTTCCACGGCTACCTGCCGGCGAAGGAGCCCGAGCGCAGCCAGAAAATCCGTGAACTGGAAAAGACCGCGCGCAAGGAAAACGCCACCCAACTCTTCATCGAAACCCCCTACCGCAGCGCGGCCCTGCTGGACGCGCTAGCCACCACGCTCGCACCCGAGACATGGGTCAGCGTCGGCACGGACCTGAGCTTGCCGACGCAATCCATCGCGACGCGCCCGGCGAAAGCATGGCGTGAGAAGAGTGCAAGCGTGAAAGATCGGCTGGTCGTATTCGGGCTGGGGGCCTGA
PROTEIN sequence
Length: 234
VATLYLIPVPLGPVSPEACLPPDTLAVARRLDHFVVERAKTARAHLKAMGHPLPIQSLNIEELNEHTPAAAIAALLAPLKAGHDVGLLSEAGCPAVADPGAALVMAAHHENIPVIPLIGPSSILLALMASGLGGQRFAFHGYLPAKEPERSQKIRELEKTARKENATQLFIETPYRSAALLDALATTLAPETWVSVGTDLSLPTQSIATRPAKAWREKSASVKDRLVVFGLGA*