ggKbase home page

SCNpilot_BF_INOC_scaffold_5982

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5982_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..639
DNA (639bp) protein (213aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=12493112 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph
SCNpilot_BF_INOC_scaffold_5982_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

623..1279
DNA (657bp) protein (219aa)
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=12493111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hydrolase
SCNpilot_BF_INOC_scaffold_5982_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1258..1608
DNA (351bp) protein (117aa)
hypothetical protein id=12493110 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5982_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1619..2569
DNA (951bp) protein (317aa)
protease; K04773 protease IV [EC:3.4.21.-] id=12493109 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
protease; K04773 protease IV [EC:3.4.21.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
protease
SCNpilot_BF_INOC_scaffold_5982_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2566..2784
DNA (219bp) protein (73aa)
transcriptional antiterminator, Rof id=12493108 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional antiterminator, Rof Tax=GWE1_Thiobacillus_62_9_curated
transcriptional antiterminator, Rof
SCNpilot_BF_INOC_scaffold_5982_6
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2841..3668)
DNA (828bp) protein (276aa)
hypothetical protein id=12493107 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5982_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4171..4872)
DNA (702bp) protein (234aa)
transmembrane protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=12493106 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWE1_Thiobacillus_62_9_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_5982_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5002)
DNA (123bp) protein (41aa)
Maf-like protein; K06287 septum formation protein id=12493105 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Maf-like protein; K06287 septum formation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Maf-like protein
Displaying 8 items

View Taxonomy