ggKbase home page

SCNpilot_BF_INOC_scaffold_751

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_751_1
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3M2_ANATU
tufA; elongation factor Tu Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
tufA; elongation factor Tu
SCNpilot_BF_INOC_scaffold_751_2
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

511..819
DNA (309bp) protein (103aa)
Protein translocase subunit SecE n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N662_ANATU
secE; preprotein translocase subunit SecE
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_3
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

848..1525
DNA (678bp) protein (226aa)
Transcription termination/antitermination protein NusG n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N661_ANATU
nusG; transcription antitermination protein NusG
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_4
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


1601..2026
DNA (426bp) protein (142aa)
50S ribosomal protein L11 id=1927668 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplK; 50S ribosomal protein L11
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_5
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


2078..2797
DNA (720bp) protein (240aa)
50S ribosomal protein L1 id=1927670 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplA; 50S ribosomal protein L1
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_6
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


3003..3530
DNA (528bp) protein (176aa)
50S ribosomal protein L10 id=1927672 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplJ; 50S ribosomal protein L10
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_7
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

3606..3983
DNA (378bp) protein (126aa)
50S ribosomal protein L7 n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B34E87
rplL; 50S ribosomal protein L7/L12
Tax=BJP_IG2069_Anaerolineales_43_63
SCNpilot_BF_INOC_scaffold_751_8
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4862..5593)
DNA (732bp) protein (244aa)
lexA; putative LexA repressor (EC:3.4.21.88)
LexA repressor id=1927676 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_9
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5981..6982)
DNA (1002bp) protein (334aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ32_ANATU
putative ABC transporter ATP-binding protein
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_10
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7003..8037)
DNA (1035bp) protein (345aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ31_ANATU
putative ABC transporter ATP-binding protein
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_11
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8039..8980)
DNA (942bp) protein (314aa)
ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA54_9CHLR
ABC transporter permease
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_12
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8984..10033)
DNA (1050bp) protein (350aa)
ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA55_9CHLR
dppB; peptide ABC transporter permease
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_13
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10149..11870)
DNA (1722bp) protein (574aa)
ABC transporter substrate binding protein (Dipeptide) n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA56_9CHLR
dppA; ABC transporter substrate binding protein (dipeptide)
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_BF_INOC_scaffold_751_14
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12281..13378)
DNA (1098bp) protein (366aa)
Next to BRCA1 protein 1 protein n=1 Tax=Fusarium oxysporum f. sp. cubense (strain race 4) RepID=N1RMQ8_FUSC4
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
SCNpilot_BF_INOC_scaffold_751_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(13450..15708)
DNA (2259bp) protein (753aa)
Putative uncharacterized protein id=2220653 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein Tax=GWC2_Chloroflexi_49_37_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_751_16
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(15710..16276)
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor id=1876681 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWB2_Chloroflexi_54_36_curated
RNA polymerase ECF-type sigma factor
SCNpilot_BF_INOC_scaffold_751_17
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

16655..17635
DNA (981bp) protein (327aa)
ABC transporter related n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B079_HERA2
ABC transporter-like protein
ABC transporter-like protein Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_BF_INOC_scaffold_751_18
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17703..19055
DNA (1353bp) protein (451aa)
ABC-2 type transporter n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B080_HERA2
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ABX05189.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiac
SCNpilot_BF_INOC_scaffold_751_19
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(19079..20551)
DNA (1473bp) protein (491aa)
Transposase id=1743536 bin=GWD2_Chloroflexi_49_16 species=uncultured archaeon GZfos19A5 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
transposase Tax=GWC2_Chloroflexi_49_37_curated
transposase
SCNpilot_BF_INOC_scaffold_751_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20651..21088
DNA (438bp) protein (146aa)
Transposase Mu n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2P5_CLOPA
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:ABR32859.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain
SCNpilot_BF_INOC_scaffold_751_21
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21164..21571)
DNA (408bp) protein (136aa)
cell wall assembly protein n=1 Tax=Vibrio splendidus RepID=UPI0003173237
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein {ECO:0000313|EMBL:AEG02759.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methy
SCNpilot_BF_INOC_scaffold_751_22
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(21869..22840)
DNA (972bp) protein (324aa)
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
Uncharacterized protein id=2230288 bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
SCNpilot_BF_INOC_scaffold_751_23
unknown

Not on your lists

comp(23084..24019)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_751_24
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(24028..25236)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
Uncharacterized protein id=2230284 bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
SCNpilot_BF_INOC_scaffold_751_25
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25443..25883)
DNA (441bp) protein (147aa)
Putative glucan synthasis protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M281_CLOCD
putative glucan synthasis protein
Putative glucan synthasis protein {ECO:0000313|EMBL:AEV69240.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clarif
SCNpilot_BF_INOC_scaffold_751_26
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(25907..27217)
DNA (1311bp) protein (437aa)
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
Uncharacterized protein id=2230288 bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
SCNpilot_BF_INOC_scaffold_751_27
unknown

Not on your lists

comp(27428..27673)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_751_28
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(27683..28729)
DNA (1047bp) protein (349aa)
Uncharacterized protein id=2230286 bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
YD repeat-/RHS repeat-containing protein
SCNpilot_BF_INOC_scaffold_751_29
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29117..29515)
DNA (399bp) protein (133aa)
Uncharacterized protein n=7 Tax=Bacillus cereus RepID=J8AGJ2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:ETK29525.1}; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DS
hypothetical protein
SCNpilot_BF_INOC_scaffold_751_30
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(29532..30695)
DNA (1164bp) protein (388aa)
Uncharacterized protein id=2230288 bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy