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SCNpilot_BF_INOC_scaffold_1041

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1041_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1041_2
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..494
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JM05_ALCFA
DNA polymerase beta domain-containing protein
DNA polymerase beta domain-containing protein {ECO:0000313|EMBL:BAP89372.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium G
SCNpilot_BF_INOC_scaffold_1041_3
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491..853
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VK8_NITEU
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

847..1404
DNA (558bp) protein (186aa)
Resolvase domain protein n=5 Tax=Proteobacteria RepID=C5T7N6_ACIDE
Site-specific DNA recombinase e14 prophage {ECO:0000313|EMBL:CDW95872.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
DNA invertase
SCNpilot_BF_INOC_scaffold_1041_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1436..3163
DNA (1728bp) protein (576aa)
sodium:proton antiporter n=1 Tax=Cupriavidus sp. WS RepID=UPI0003757BCD
TrkA-N:Sodium/hydrogen exchanger
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3181..4068)
DNA (888bp) protein (296aa)
Usp-like protein n=3 Tax=Azotobacter vinelandii RepID=C1DGW4_AZOVD
Usp-like protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4095..6833)
DNA (2739bp) protein (913aa)
Cation transportingP-type ATPase n=3 Tax=Azotobacter vinelandii RepID=C1DGW3_AZOVD
Cation transportingP-type ATPase
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7004..7888
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F18B4
uspA; UspA
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7891..8091
DNA (201bp) protein (67aa)
Phage transcriptional regulator AlpA n=6 Tax=Pseudomonas RepID=L1M360_PSEPU
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:GAO23812.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
putative helicase
SCNpilot_BF_INOC_scaffold_1041_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8088..8438
DNA (351bp) protein (117aa)
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_1041_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..8972)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE251
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47699.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_1041_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9651..10157)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA repair protein
SCNpilot_BF_INOC_scaffold_1041_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10533..11471
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ
transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1041_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..12337
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1041_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12503..13177
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA685
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1041_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13182..14636
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1041_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14716..15975)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU27_9GAMM
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM47879.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;"
SCNpilot_BF_INOC_scaffold_1041_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16072..16491)
DNA (420bp) protein (140aa)
Universal stress protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HNF0_PSEUO
UspA domain-containing protein Tax=CG_Hydro_01
UspA domain-containing protein
SCNpilot_BF_INOC_scaffold_1041_19
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16488..17660)
DNA (1173bp) protein (391aa)
Glutathione-regulated potassium-proton antiporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMZ9_PSEUO
sodium/hydrogen exchanger Tax=GWA2_Gallionellales_60_142_curated
potassium transporter Kef
SCNpilot_BF_INOC_scaffold_1041_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17670..18014)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0C9_9GAMM
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_1041_21
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18026..18394)
DNA (369bp) protein (123aa)
Histidine triad (HIT) protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLX9_SIDLE
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADE12574.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans l
SCNpilot_BF_INOC_scaffold_1041_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18391..18777)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYQ4_9GAMM
crcB protein Tax=CG_Hydro_01
crcB protein
SCNpilot_BF_INOC_scaffold_1041_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19284..20693
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
SCNpilot_BF_INOC_scaffold_1041_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20690..21733
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_BF_INOC_scaffold_1041_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21730..24846
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
heavy metal efflux pump, cobalt-zinc-cadmium
SCNpilot_BF_INOC_scaffold_1041_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25112..26017)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375ED32
putative phage integrase Tax=RBG_16_Betaproteobacteria_64_18_curated
integrase family protein
SCNpilot_BF_INOC_scaffold_1041_27
unknown

Not on your lists

26084..26305
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1041_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26733..28271)
DNA (1539bp) protein (513aa)
SpoVR family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DCBEA
SpoVR family protein
SpoVR like family protein {ECO:0000313|EMBL:AAZ97187.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus
SCNpilot_BF_INOC_scaffold_1041_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28273..29529)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381EC44
hypothetical protein; K09786 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1041_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29540..31459)
DNA (1920bp) protein (640aa)
PrkA family serine protein kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000365C770
putative Serine protein kinase, PrkA; K07180 serine protein kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Serine protein kinase, PrkA
Displaying items 1-30 of 42 in total

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