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SCNpilot_BF_INOC_scaffold_1103

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1103_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003653DD1
ankyrin Tax=RBG_16_Betaproteobacteria_58_11_curated
ankyrin
SCNpilot_BF_INOC_scaffold_1103_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(524..2071)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003778D59
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1103_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..2754)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037612E5
Uncharacterized protein {ECO:0000313|EMBL:GAO34722.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_1103_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..3164)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1EDF
biopolymer transport protein ExbD/TolR Tax=RBG_16_Betaproteobacteria_58_11_curated
biopolymer transport protein ExbD/TolR
SCNpilot_BF_INOC_scaffold_1103_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3174..4928)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E976A
Biopolymer transporter ExbB {ECO:0000313|EMBL:GAO34724.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
MotA/TolQ/ExbB proton channel family protein
SCNpilot_BF_INOC_scaffold_1103_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5055..15170)
DNA (10116bp) protein (3372aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362276C
hemagglutinin-like protein
Hemagglutinin-like protein {ECO:0000313|EMBL:BAN36628.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella d
SCNpilot_BF_INOC_scaffold_1103_7
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..16842)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003626121
Uncharacterized protein {ECO:0000313|EMBL:GAO34726.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hemolysin activation/secretion protein
SCNpilot_BF_INOC_scaffold_1103_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17043..18299)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AC804
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36630.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_1103_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18378..19130)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DD1AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36631.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_1103_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19348..20298)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367AF19
LuxR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1103_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20309..22150
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367B27A
diguanylate cyclase/phosphodiesterase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_1103_12
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22275..22826)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003675CAD
Uncharacterized protein {ECO:0000313|EMBL:EOA03255.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum f
SCNpilot_BF_INOC_scaffold_1103_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23047..23286
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381C689
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1103_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23475..24005
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374306E
outer membrane lipoprotein; K03098 outer membrane lipoprotein Blc Tax=GWE1_Thiobacillus_62_9_curated
outer membrane lipoprotein
SCNpilot_BF_INOC_scaffold_1103_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24016..24540
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AB269
Appr-1-p processing domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Appr-1-p processing domain-containing protein
SCNpilot_BF_INOC_scaffold_1103_16
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24575..25672
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037878D9
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJQ94820.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gy
SCNpilot_BF_INOC_scaffold_1103_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25732..26364
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003617AFE
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1103_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26711..29284
DNA (2574bp) protein (858aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D48D4
SCNpilot_BF_INOC_scaffold_1103_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29281..29724
DNA (444bp) protein (148aa)
chemotaxis protein CheY n=1 Tax=Thiobacillus thioparus RepID=UPI00035D3C77
response regulator receiver domain-containing protein; K02485 two-component system, unclassified family, response regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_BF_INOC_scaffold_1103_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29775..32246
DNA (2472bp) protein (824aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B75DC
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_1103_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32371..32715
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371865B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1103_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32745..33398)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A87F
signal transduction histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1103_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33395..35077)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644CFC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_BF_INOC_scaffold_1103_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35180..36043)
DNA (864bp) protein (288aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AAB18
ATP-binding ABC transporter protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-binding ABC transporter protein rbh
SCNpilot_BF_INOC_scaffold_1103_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36068..37147)
DNA (1080bp) protein (360aa)
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003823152
SCNpilot_BF_INOC_scaffold_1103_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37144..39798)
DNA (2655bp) protein (885aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Thiobacillus thioparus RepID=UPI000382C67B
SCNpilot_BF_INOC_scaffold_1103_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39823..41118)
DNA (1296bp) protein (432aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydro
type II citrate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037BA3DC
SCNpilot_BF_INOC_scaffold_1103_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41362..42057)
DNA (696bp) protein (232aa)
succinate dehydrogenase subunit B (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinate dehydrogenase subunit B (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000366FC98
SCNpilot_BF_INOC_scaffold_1103_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42057..43811)
DNA (1755bp) protein (585aa)
succinate dehydrogenase subunit A (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogeno
succinate dehydrogenase flavoprotein subunit n=1 Tax=Thiobacillus thioparus RepID=UPI0003760C49
SCNpilot_BF_INOC_scaffold_1103_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43808..44152)
DNA (345bp) protein (115aa)
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit id=12495349 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit Tax=GWE1_Thiobacillus_62_9_curated
succinate dehydrogenase subunit D (EC:1.3.5.1)
Displaying items 1-30 of 42 in total

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