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SCNpilot_BF_INOC_scaffold_1387

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1387_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..474
DNA (474bp) protein (158aa)
protein tyrosine phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=GWE1_Thiobacillus_62_9_curated
protein tyrosine phosphatase (EC:3.1.3.48)
phosphotyrosine protein phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A6771
SCNpilot_BF_INOC_scaffold_1387_2
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

629..1345
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003746C67
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ECF family RNA polymerase sigma factor
SCNpilot_BF_INOC_scaffold_1387_3
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1433..2032
DNA (600bp) protein (200aa)
ferritin n=1 Tax=Thiobacillus thioparus RepID=UPI0003616C59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC22101.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_BF_INOC_scaffold_1387_4
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2044..2427
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CE5EE
Cytochrome C {ECO:0000313|EMBL:KDP87712.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
putative cytochrome c
SCNpilot_BF_INOC_scaffold_1387_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2509..5100)
DNA (2592bp) protein (864aa)
RNAse E (EC:3.1.4.-) rbh
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Bet
ribonuclease E n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0F99
SCNpilot_BF_INOC_scaffold_1387_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5467..6486
DNA (1020bp) protein (340aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase C n=1 Tax=Thiobacillus thioparus RepID=UPI000368ADF0
SCNpilot_BF_INOC_scaffold_1387_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6470..7126
DNA (657bp) protein (219aa)
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=12493111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hydrolase
SCNpilot_BF_INOC_scaffold_1387_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7105..7455
DNA (351bp) protein (117aa)
(2Fe-2S)-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F4CD3
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1387_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7466..8416
DNA (951bp) protein (317aa)
protease; K04773 protease IV [EC:3.4.21.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase S49 n=1 Tax=Thiobacillus thioparus RepID=UPI00037D5B5B
protease
SCNpilot_BF_INOC_scaffold_1387_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..8622
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003705332
transcriptional antiterminator, Rof Tax=GWE1_Thiobacillus_62_9_curated
transcriptional antiterminator, Rof
SCNpilot_BF_INOC_scaffold_1387_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8634..9341)
DNA (708bp) protein (236aa)
transmembrane protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWE1_Thiobacillus_62_9_curated
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003774B1D
transmembrane protein
SCNpilot_BF_INOC_scaffold_1387_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9317..9946)
DNA (630bp) protein (210aa)
septum formation protein Maf n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81F4
Maf-like protein; K06287 septum formation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Maf-like protein
SCNpilot_BF_INOC_scaffold_1387_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9943..11790)
DNA (1848bp) protein (616aa)
pyruvate carboxylase subunit B (EC:4.1.1.3); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] Tax=GWE1_Thiobacillus_62_9_curated
pyruvate carboxylase subunit B (EC:4.1.1.3)
pyruvate carboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI000374C5DF
SCNpilot_BF_INOC_scaffold_1387_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11792..13210)
DNA (1419bp) protein (473aa)
pyruvate carboxylase subunit A (EC:6.3.4.14); K01959 pyruvate carboxylase subunit A [EC:6.4.1.1] Tax=GWE1_Thiobacillus_62_9_curated
pyruvate carboxylase subunit A (EC:6.3.4.14)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003618A3C
SCNpilot_BF_INOC_scaffold_1387_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13317..13748
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D85B5
hypothetical protein; K07040 uncharacterized protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1387_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13795..13974
DNA (180bp) protein (60aa)
50S ribosomal protein L32 id=1360988 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=GWE1_Thiobacillus_62_9_curated
rpmF; 50S ribosomal protein L32
SCNpilot_BF_INOC_scaffold_1387_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14043..15062
DNA (1020bp) protein (340aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphate acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604250
glycerol-3-phosphate acyltransferase PlsX
SCNpilot_BF_INOC_scaffold_1387_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15059..16018
DNA (960bp) protein (320aa)
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000372375F
SCNpilot_BF_INOC_scaffold_1387_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16031..16954
DNA (924bp) protein (308aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=GWE1_Thiobacillus_62_9_curated
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase id=1359362 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_1387_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..17736
DNA (771bp) protein (257aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWE1_Thiobacillus_62_9_curated
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F4B51
SCNpilot_BF_INOC_scaffold_1387_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17809..18042
DNA (234bp) protein (78aa)
Acyl carrier protein id=1359360 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria;
SCNpilot_BF_INOC_scaffold_1387_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18210..19442
DNA (1233bp) protein (411aa)
3-oxoacyl-(acyl carrier protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037BD0B0
SCNpilot_BF_INOC_scaffold_1387_23
Thiobacillus thioparus, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19566..19709
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036069FE
SCNpilot_BF_INOC_scaffold_1387_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19706..20515
DNA (810bp) protein (270aa)
aminodeoxychorismate lyase apoprotein (EC:4.1.3.38); K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
aminodeoxychorismate lyase (EC:4.1.3.38)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DDD4B
SCNpilot_BF_INOC_scaffold_1387_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20499..21497
DNA (999bp) protein (333aa)
aminodeoxychorismate lyase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F7E7C
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
aminodeoxychorismate lyase
SCNpilot_BF_INOC_scaffold_1387_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21494..22105
DNA (612bp) protein (204aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thymidylate kinase (EC:2.7.4.9)
thymidylate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035D462D
SCNpilot_BF_INOC_scaffold_1387_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22102..23085
DNA (984bp) protein (328aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038084FA
SCNpilot_BF_INOC_scaffold_1387_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23098..23469
DNA (372bp) protein (124aa)
pilus assembly protein PilZ n=1 Tax=Thiobacillus thioparus RepID=UPI00035E8156
type IV pilus assembly protein PilZ; K02676 type IV pilus assembly protein PilZ Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
type IV pilus assembly protein PilZ
SCNpilot_BF_INOC_scaffold_1387_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23496..24266
DNA (771bp) protein (257aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00038283A3
TatD-related deoxyribonuclease
SCNpilot_BF_INOC_scaffold_1387_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24380..24883)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A89E0
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying items 1-30 of 32 in total

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