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SCNpilot_BF_INOC_scaffold_1471

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1471_31
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29548..30081)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FC6D7
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH ubiquinone oxidoreductase 20 kDa subunit
SCNpilot_BF_INOC_scaffold_1471_32
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30083..31570)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4165
NADH dehydrogenase (ubiquinone) 30 kDa subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH dehydrogenase (ubiquinone) 30 kDa subunit
SCNpilot_BF_INOC_scaffold_1471_33
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31572..33023)
DNA (1452bp) protein (484aa)
NADH/ubiquinone/plastoquinone (EC:1.-.-.-) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH/ubiquinone/plastoquinone (EC:1.-.-.-)
oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI000367CAA1
SCNpilot_BF_INOC_scaffold_1471_34
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33027..33164)
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371C9F5
hyfE; hydrogenase 4 membrane component Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hyfE; hydrogenase 4 membrane component
SCNpilot_BF_INOC_scaffold_1471_35
unknown

Not on your lists

33233..33394
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1471_36
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33682..34626)
DNA (945bp) protein (315aa)
formate hydrogenlyase n=1 Tax=Thiobacillus thioparus RepID=UPI00035D0358
formate hydrogenlyase subunit 4 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate hydrogenlyase subunit 4
SCNpilot_BF_INOC_scaffold_1471_37
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34623..36635)
DNA (2013bp) protein (671aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364A54E
NADH/ubiquinone/plastoquinone (complex I) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH/ubiquinone/plastoquinone (complex I)
SCNpilot_BF_INOC_scaffold_1471_38
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36735..36932
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362C7F7
helix-turn-helix protein, CopG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
helix-turn-helix protein, CopG
SCNpilot_BF_INOC_scaffold_1471_39
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36957..37517)
DNA (561bp) protein (187aa)
carbonate dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI00038076D7
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_40
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37514..39316)
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C8216
high affinity sulfate transporter SulP Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
high affinity sulfate transporter SulP
SCNpilot_BF_INOC_scaffold_1471_41
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39660..40931
DNA (1272bp) protein (424aa)
sulfide-quinone reductase (EC:1.-.-.-)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003728980
NADH dehydrogenase, FAD-containing subunit Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_BF_INOC_scaffold_1471_42
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40957..41385)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378A1B7
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_43
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41530..41901
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1680
putative thioredoxin-like protein Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin-like protein
SCNpilot_BF_INOC_scaffold_1471_44
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41894..42364
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362BF49
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_45
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42321..43223)
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003727263
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA Tax=GWE1_Thiobacillus_62_9_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1471_46
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43363..44238
DNA (876bp) protein (292aa)
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
heat shock protein HtpX n=1 Tax=Thiobacillus thioparus RepID=UPI000371ED1B
heat shock protein HtpX
SCNpilot_BF_INOC_scaffold_1471_47
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44260..45228
DNA (969bp) protein (323aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367B41B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_48
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45332..46306
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037720B8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_49
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46346..46774
DNA (429bp) protein (143aa)
phosphate-starvation-inducible E n=1 Tax=Thiobacillus thioparus RepID=UPI000363F7BF
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_50
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46771..47073
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036143E5
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_51
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47123..48331
DNA (1209bp) protein (403aa)
putative tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SAM-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003655674
tRNA and rRNA cytosine-C5-methylase
SCNpilot_BF_INOC_scaffold_1471_52
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48391..50205
DNA (1815bp) protein (605aa)
AMP-dependent synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003669576
long-chain fatty-acid-CoA ligase
Long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:AAZ98550.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiob
SCNpilot_BF_INOC_scaffold_1471_53
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50235..51464
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003674896
long chain fatty acid transport protein; K06076 long-chain fatty acid transport protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
long chain fatty acid transport protein
SCNpilot_BF_INOC_scaffold_1471_54
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51467..52756
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364D01F
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1471_55
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52818..53990
DNA (1173bp) protein (391aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000372D26F
fatty acid desaturase
SCNpilot_BF_INOC_scaffold_1471_56
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54078..54245)
DNA (168bp) protein (56aa)
50S ribosomal protein L33
50S ribosomal protein L33P; K02913 large subunit ribosomal protein L33 id=12496287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
50S ribosomal protein L33P; K02913 large subunit ribosomal protein L33 Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_1471_57
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54275..54511)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL28_THIDA
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_1471_58
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54620..55294)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382E708
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA repair protein RadC
SCNpilot_BF_INOC_scaffold_1471_59
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55328..56533
DNA (1206bp) protein (402aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5 4.1.1.36); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
phosphopantothenate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E08AA
SCNpilot_BF_INOC_scaffold_1471_60
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56550..56996
DNA (447bp) protein (149aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=GWE1_Thiobacillus_62_9_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E91CC
Displaying items 31-60 of 61 in total

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