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SCNpilot_BF_INOC_scaffold_1553

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1553_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1069
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381D804
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97675.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1553_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1108..1740
DNA (633bp) protein (211aa)
LemA family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037510E1
hypothetical protein; K06872 uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1748..2587
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F485E
hypothetical protein; K06872 uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2581..3096
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003755BCE
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3106..3513
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493559 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3529..4458
DNA (930bp) protein (310aa)
band 7 protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493558 bin=THIO_HI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
band 7 protein
SCNpilot_BF_INOC_scaffold_1553_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4467..5684)
DNA (1218bp) protein (406aa)
major facilitator transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003661625
lysophospholipid transporter LplT
Putative membrane protein {ECO:0000313|EMBL:AAZ97671.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" s
SCNpilot_BF_INOC_scaffold_1553_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5845..6789
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035C76F0
transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1553_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7157
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E7833
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7171..7479)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038031FE
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1553_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7498..7908)
DNA (411bp) protein (137aa)
ferric uptake regulator family protein; K09826 Fur family transcriptional regulator, iron response regulator id=12493553 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferric uptake regulator family protein; K09826 Fur family transcriptional regulator, iron response regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ferric uptake regulator family protein
SCNpilot_BF_INOC_scaffold_1553_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8063..9367
DNA (1305bp) protein (435aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hisD; histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003670348
SCNpilot_BF_INOC_scaffold_1553_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..10445
DNA (1065bp) protein (355aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWE1_Thiobacillus_62_9_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
histidinol-phosphate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D2F21
SCNpilot_BF_INOC_scaffold_1553_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10476..11063
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
imidazoleglycerol-phosphate dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI0003605ACC
SCNpilot_BF_INOC_scaffold_1553_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11092..11778
DNA (687bp) protein (229aa)
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
imidazole glycerol phosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003653DC7
SCNpilot_BF_INOC_scaffold_1553_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12341..12496
DNA (156bp) protein (52aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] id=12493548 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylform
SCNpilot_BF_INOC_scaffold_1553_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12512..13267
DNA (756bp) protein (252aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
imidazole glycerol phosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003696E34
SCNpilot_BF_INOC_scaffold_1553_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13566..13916
DNA (351bp) protein (117aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00037731CB
SCNpilot_BF_INOC_scaffold_1553_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13909..14247
DNA (339bp) protein (113aa)
HIT family hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A650D
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HIT family protein
SCNpilot_BF_INOC_scaffold_1553_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14266..14478
DNA (213bp) protein (71aa)
preprotein translocase subunit TatA n=1 Tax=Thiobacillus thioparus RepID=UPI00037BFD0F
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tatA; twin-arginine translocation protein TatA
SCNpilot_BF_INOC_scaffold_1553_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14558..15043
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374C262
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
twin-arginine translocation protein TatB
SCNpilot_BF_INOC_scaffold_1553_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15858
DNA (819bp) protein (273aa)
twin-arginine protein translocation system subunit TatC n=1 Tax=Thiobacillus thioparus RepID=UPI00035C6AFD
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Sec-independent protein translocase TatC
SCNpilot_BF_INOC_scaffold_1553_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16008..17210
DNA (1203bp) protein (401aa)
ammonium transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035C1699
putative ammonium transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ammonium transporter
SCNpilot_BF_INOC_scaffold_1553_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17216..18460)
DNA (1245bp) protein (415aa)
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CFF13
Serine/threonine protein kinase
SCNpilot_BF_INOC_scaffold_1553_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18474..19217)
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F35D8
oxidoreductase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
oxidoreductase
SCNpilot_BF_INOC_scaffold_1553_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19214..20491)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378A9C9
putative squalene/phytoene dehydrogenase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
squalene/phytoene dehydrogenase
SCNpilot_BF_INOC_scaffold_1553_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20488..21333)
DNA (846bp) protein (282aa)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21); K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
phytoene synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000368E197
SCNpilot_BF_INOC_scaffold_1553_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21336..22142)
DNA (807bp) protein (269aa)
phytoene synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003678107
putative phytoene synthase-like protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phytoene synthase-like protein
SCNpilot_BF_INOC_scaffold_1553_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22392..23690
DNA (1299bp) protein (433aa)
trigger factor n=1 Tax=Thiobacillus thioparus RepID=UPI00035DE1DA
trigger factor; K03545 trigger factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
trigger factor
SCNpilot_BF_INOC_scaffold_1553_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23690..24346
DNA (657bp) protein (219aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
Clp protease proteolytic subunit ClpP n=1 Tax=Thiobacillus denitrificans RepID=UPI00037455E4
Displaying items 1-30 of 53 in total

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