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SCNpilot_BF_INOC_scaffold_1630

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1630_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
ispG, gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=GWE1_Thiobacillus_62_9_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=1373440 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_1630_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224..1039)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003612C3D
hypothetical protein; K15539 cytoskeleton protein RodZ Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1036..1812)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374CD6D
TPR repeat-containing pilus assembly protein PilF
Putative pilus assembly protein PilF, TPR repeat {ECO:0000313|EMBL:AAZ96545.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
SCNpilot_BF_INOC_scaffold_1630_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1809..2927)
DNA (1119bp) protein (373aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D5F95
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2937..3365)
DNA (429bp) protein (143aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=GWE1_Thiobacillus_62_9_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase id=1357660 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_1630_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3524..4810)
DNA (1287bp) protein (429aa)
cell cycle protein MesJ; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036084D7
cell cycle protein MesJ
SCNpilot_BF_INOC_scaffold_1630_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4836..5804)
DNA (969bp) protein (323aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003611905
SCNpilot_BF_INOC_scaffold_1630_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5896..6378)
DNA (483bp) protein (161aa)
fkbp-type peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidylprolyl isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B3FE9
FKBP-type peptidylprolyl isomerase
SCNpilot_BF_INOC_scaffold_1630_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6375..6839)
DNA (465bp) protein (155aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
alkyl hydroperoxide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000366A787
alkyl hydroperoxide reductase
SCNpilot_BF_INOC_scaffold_1630_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..8033
DNA (1119bp) protein (373aa)
cupin n=1 Tax=Thiobacillus thioparus RepID=UPI000366EC5F
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8030..8500
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366E1ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96537.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1630_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8502..9275)
DNA (774bp) protein (258aa)
hypothetical protein id=12493881 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9293..10366)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364B141
hypothetical protein; K11720 lipopolysaccharide export system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10363..11442)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003669E92
hypothetical protein; K07091 lipopolysaccharide export system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11605..13116
DNA (1512bp) protein (504aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
leucyl aminopeptidase (EC:3.4.11.1)
multifunctional aminopeptidase A n=1 Tax=Thiobacillus thioparus RepID=UPI000370ADF5
SCNpilot_BF_INOC_scaffold_1630_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13127..13555
DNA (429bp) protein (143aa)
DNA polymerase III subunit chi (EC:2.7.7.7); K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase III subunit chi (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B0C38
SCNpilot_BF_INOC_scaffold_1630_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13566..14042
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036508BC
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14138..16876
DNA (2739bp) protein (913aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02
valyl-tRNA synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B0708
SCNpilot_BF_INOC_scaffold_1630_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17027..18292)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DFEF4
putative long-chain fatty acid transport protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
long-chain fatty acid transport protein
SCNpilot_BF_INOC_scaffold_1630_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18499..19008)
DNA (510bp) protein (170aa)
NADH dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CBDE8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19089..19316)
DNA (228bp) protein (76aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator SirA n=1 Tax=Thiobacillus thioparus RepID=UPI00037DE859
hypothetical protein
SCNpilot_BF_INOC_scaffold_1630_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19451..19780)
DNA (330bp) protein (110aa)
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00038011A3
rhodanese-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rhodanese-like protein
SCNpilot_BF_INOC_scaffold_1630_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19881..20819)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C29E7
DMSO reductase subunit C; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DMSO reductase subunit C
Displaying 23 items

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