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SCNpilot_BF_INOC_scaffold_1714

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1714_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44..973)
DNA (930bp) protein (310aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D0816
SCNpilot_BF_INOC_scaffold_1714_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(970..1944)
DNA (975bp) protein (325aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B5A03
SCNpilot_BF_INOC_scaffold_1714_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1934..2872)
DNA (939bp) protein (313aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI0003650123
SCNpilot_BF_INOC_scaffold_1714_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2821..3294)
DNA (474bp) protein (158aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI0003650123
SCNpilot_BF_INOC_scaffold_1714_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3291..4415)
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrop
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase n=1 Tax=Thiobacillus thioparus RepID=UPI000382BD46
SCNpilot_BF_INOC_scaffold_1714_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5572)
DNA (1158bp) protein (386aa)
cell division protein FtsW n=1 Tax=Thiobacillus thioparus RepID=UPI00037B71E9
cell division protein FtsW
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Beta
SCNpilot_BF_INOC_scaffold_1714_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5572..6996)
DNA (1425bp) protein (475aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C414B
SCNpilot_BF_INOC_scaffold_1714_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6993..8078)
DNA (1086bp) protein (362aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D82E4
SCNpilot_BF_INOC_scaffold_1714_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8080..9462)
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobact
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00036BDA3A
SCNpilot_BF_INOC_scaffold_1714_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9557..11062)
DNA (1506bp) protein (502aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A190D
SCNpilot_BF_INOC_scaffold_1714_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11062..12792)
DNA (1731bp) protein (577aa)
peptidoglycan synthetase FtsI (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AAZ96066.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AAZ96066.1};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hyd
cell division protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003656ECD
SCNpilot_BF_INOC_scaffold_1714_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12789..13061)
DNA (273bp) protein (91aa)
cell division protein FtsL n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4ABF
cell division protein FtsL; K03586 cell division protein FtsL Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cell division protein FtsL
SCNpilot_BF_INOC_scaffold_1714_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13058..13993)
DNA (936bp) protein (312aa)
methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
16S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003628FA8
methyltransferase
SCNpilot_BF_INOC_scaffold_1714_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13990..14436)
DNA (447bp) protein (149aa)
cell division protein MraZ n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0D41
hypothetical protein; K03925 MraZ protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15108..15620
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037ECD67
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15733..16764)
DNA (1032bp) protein (344aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWE1_Thiobacillus_62_9_curated
dihydroorotase (EC:3.5.2.3)
dihydroorotase n=1 Tax=Thiobacillus thioparus RepID=UPI00036214EA
SCNpilot_BF_INOC_scaffold_1714_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16761..17636)
DNA (876bp) protein (292aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376DE2F
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17653..18003
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364E9D4
hypothetical protein; K07460 putative endonuclease Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18015..18608
DNA (594bp) protein (198aa)
phosphoheptose isomerase (EC:5.3.1.-); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoheptose isomerase (EC:5.3.1.-)
DnaA initiator-associating protein DiaA n=1 Tax=Thiobacillus thioparus RepID=UPI000370B1B5
SCNpilot_BF_INOC_scaffold_1714_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18605..19177
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366352A
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19195..19674
DNA (480bp) protein (160aa)
nucleotidyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9CD6
cytidyltransferase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytidyltransferase
SCNpilot_BF_INOC_scaffold_1714_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19685..21148
DNA (1464bp) protein (488aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=GWE1_Thiobacillus_62_9_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036BF154
SCNpilot_BF_INOC_scaffold_1714_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21151..22383
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003767F14
Cyclic diguanylate phosphodiesterase {ECO:0000313|EMBL:GAO36961.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulf
diguanylate phosphodiesterase
SCNpilot_BF_INOC_scaffold_1714_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22403..22963
DNA (561bp) protein (187aa)
phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000368EBFE
transcriptional regulator PyrR Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcriptional regulator PyrR
SCNpilot_BF_INOC_scaffold_1714_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23047..23589
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038179D5
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1714_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23602..23802)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036744DE
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_1714_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23789..25243)
DNA (1455bp) protein (485aa)
D-alanyl-D-alanine carboxypeptidase PBP3 (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=GWE1_Thi
D-alanyl-D-alanine carboxypeptidase PBP3 (EC:3.4.16.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C65DF
SCNpilot_BF_INOC_scaffold_1714_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25309..26952)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003678F3B
signal transduction protein Tax=GWE1_Thiobacillus_62_9_curated
signal transduction protein
SCNpilot_BF_INOC_scaffold_1714_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27026..28054)
DNA (1029bp) protein (343aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Vi polysaccharide biosynthesis protein vipB/tviC n=1 Tax=Thiobacillus thioparus RepID=UPI000369A316
NAD-dependent epimerase/dehydratase
SCNpilot_BF_INOC_scaffold_1714_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28054..29334)
DNA (1281bp) protein (427aa)
UDP-glucose/GDP-mannose dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
UDP-N-acetyl-D-galactosamine dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000365CC0F
UDP-glucose/GDP-mannose dehydrogenase
Displaying items 1-30 of 32 in total

View Taxonomy