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SCNpilot_BF_INOC_scaffold_1781

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1781_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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50..655
DNA (606bp) protein (202aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=GWE1_Thiobacillus_62_9_curated
riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI000375ADDD
SCNpilot_BF_INOC_scaffold_1781_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..1740
DNA (1086bp) protein (362aa)
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein (EC:3.5.4.25 4.1.2.-)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=292415 s
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000360BCCA
SCNpilot_BF_INOC_scaffold_1781_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1763..2233
DNA (471bp) protein (157aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D9146
SCNpilot_BF_INOC_scaffold_1781_4
unknown

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comp(2244..2513)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1781_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2684..3637
DNA (954bp) protein (318aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine monophosphate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A94A0
SCNpilot_BF_INOC_scaffold_1781_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3579..4106
DNA (528bp) protein (176aa)
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=12494492 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phosphatidylglycerophosphatase (EC:3.1.3.27)
SCNpilot_BF_INOC_scaffold_1781_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4094..4591
DNA (498bp) protein (166aa)
competence damage-inducible protein A n=1 Tax=Thiobacillus thioparus RepID=UPI00036EE38B
CinA protein
CinA protein {ECO:0000313|EMBL:AAZ98148.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrifican
SCNpilot_BF_INOC_scaffold_1781_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..5542)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DE0A2
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1781_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5705..6043)
DNA (339bp) protein (113aa)
Two-component transcriptional regulatory protein qseb n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G3Z8_RALS8
two-component transcriptional regulator qseb
Two-component transcriptional regulatory protein qseb {ECO:0000313|EMBL:AEG70122.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;
SCNpilot_BF_INOC_scaffold_1781_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7205
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003726CC9
putative regulatory protein RecX; K03565 regulatory protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
regulatory protein RecX
SCNpilot_BF_INOC_scaffold_1781_11

Not on your lists

comp(7195..7611)
DNA (417bp) protein (139aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1D7U0_9ZZZZ
PilT domain-containing protein {ECO:0000313|EMBL:EQD77489.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1781_12

Not on your lists

comp(7611..7865)
DNA (255bp) protein (85aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T1B1U8_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD62533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prevent-host-death family protein
SCNpilot_BF_INOC_scaffold_1781_13
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7946..8293)
DNA (348bp) protein (116aa)
transposase IS200 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B326DF
transposase IS200-family protein; K07491 putative transposase Tax=RBG_16_Gammaproteobacteria_57_12_curated
transposase
SCNpilot_BF_INOC_scaffold_1781_14
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8299..8502)
DNA (204bp) protein (68aa)
transposase IS200 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B5C244
Transposase {ECO:0000313|EMBL:KIF81806.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
transposase
SCNpilot_BF_INOC_scaffold_1781_15
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8851..9318)
DNA (468bp) protein (156aa)
fimbrial protein n=1 Tax=Neisseria lactamica RepID=UPI0002E9E421
Fimbrial protein {ECO:0000313|EMBL:EXB87815.1}; TaxID=1310639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumann
Fimbrial protein pilin
SCNpilot_BF_INOC_scaffold_1781_16
unknown

Not on your lists

9880..10086
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1781_17
unknown

Not on your lists

10140..10961
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1781_18

Not on your lists

comp(10989..12617)
DNA (1629bp) protein (543aa)
Marine sediment metagenome DNA, contig: S01H4_S11612 {ECO:0000313|EMBL:GAH00531.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SCNpilot_BF_INOC_scaffold_1781_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13020)
DNA (372bp) protein (124aa)
QacE-like protein; integron orf n=1 Tax=Janthinobacterium lividum RepID=UPI000289B9F7
QacE {ECO:0000313|EMBL:KGI79240.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
QacE-like protein; integron orf
SCNpilot_BF_INOC_scaffold_1781_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13287..14144
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL96_METS0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1781_21
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14244..15554
DNA (1311bp) protein (437aa)
Replication initiation factor n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GL20_NITSI
replication initiation factor
Replication initiation factor {ECO:0000313|EMBL:AEJ01793.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon
SCNpilot_BF_INOC_scaffold_1781_22
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15772..16833
DNA (1062bp) protein (354aa)
integrase n=1 Tax=Methylotenera mobilis RepID=UPI0003810769
integrase family protein Tax=GWA2_Curvibacter_64_110_curated
integrase
SCNpilot_BF_INOC_scaffold_1781_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17014..17187)
DNA (174bp) protein (58aa)
Probable transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGT9_THIDA
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98154.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
Displaying 23 items

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