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SCNpilot_BF_INOC_scaffold_1928

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1928_1

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comp(3..107)
DNA (105bp) protein (35aa)
Phage transcriptional regulator, AlpA n=1 Tax=mine drainage metagenome RepID=E6PRZ6_9ZZZZ
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prophage CP4-57 regulatory
SCNpilot_BF_INOC_scaffold_1928_2
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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748..1104
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCB45793.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
SCNpilot_BF_INOC_scaffold_1928_3
unknown

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1122..1385
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1928_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1917..2462
DNA (546bp) protein (182aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003732F3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45869.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="De
SCNpilot_BF_INOC_scaffold_1928_5
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2483..4024
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361F38B
carbohydrate-selective porin
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_BF_INOC_scaffold_1928_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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4043..4402
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036645A1
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_1928_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4415..5230
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003767671
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1928_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5227..6630
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F919A
regulatory protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
regulatory protein
SCNpilot_BF_INOC_scaffold_1928_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6652..8985)
DNA (2334bp) protein (778aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] Tax=GWE1_Thiobacillus_62_9_curated
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cadmium-translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_1928_10
unknown

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comp(9004..9339)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1928_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..9776)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=1341260 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrogen regulatory protein P-II Tax=GWE1_Thiobacillus_62_9_curated
nitrogen regulatory protein P-II
SCNpilot_BF_INOC_scaffold_1928_12
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..12919)
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS
CzcA family heavy metal efflux pump Tax=GWA2_Gallionellales_54_124_curated
CzcA family heavy metal efflux pump
SCNpilot_BF_INOC_scaffold_1928_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12930..14159)
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=GWE1_Thiobacillus_62_9_curated
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_1928_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14192..15502)
DNA (1311bp) protein (437aa)
Outer membrane efflux protein id=1332411 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane efflux protein Tax=GWE1_Thiobacillus_62_9_curated
outer membrane efflux protein
Displaying 14 items

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