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SCNpilot_BF_INOC_scaffold_2088

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2088_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] Tax=
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
sirohydrochlorin ferrochelatase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E0442
SCNpilot_BF_INOC_scaffold_2088_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..2010)
DNA (1707bp) protein (569aa)
sodium:proton antiporter n=1 Tax=Thiobacillus thioparus RepID=UPI000363A4E4
putative efflux pump/antiporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
efflux pump/antiporter
SCNpilot_BF_INOC_scaffold_2088_3
unknown

Not on your lists

2274..2750
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2088_4
unknown

Not on your lists

3260..3982
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2088_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3799..4596)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_2088_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4857..5699
DNA (843bp) protein (281aa)
pyruvate:ferredoxin (flavodoxin) oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyruvate-flavodoxin oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036026B7
pyruvate:ferredoxin (flavodoxin) oxidoreductase
SCNpilot_BF_INOC_scaffold_2088_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5701..6717
DNA (1017bp) protein (339aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FB359
SCNpilot_BF_INOC_scaffold_2088_8
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6759..8582
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037D35D7
sodium/hydrogen exchanger Tax=GWA2_Deltaproteobacteria_54_12_curated
sodium/hydrogen exchanger
SCNpilot_BF_INOC_scaffold_2088_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8644..9309)
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003650186
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2088_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..10340)
DNA (1035bp) protein (345aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E767F
SCNpilot_BF_INOC_scaffold_2088_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10566..11450)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036782CC
phenazine biosynthesis protein PhzF family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phenazine biosynthesis protein PhzF family protein
SCNpilot_BF_INOC_scaffold_2088_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11515..12288)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380E4D5
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_13
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12367..13722)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380E4D5
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
SCNpilot_BF_INOC_scaffold_2088_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14025..15014)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376F190
cynR; DNA-binding transcriptional regulator CynR; K11921 LysR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cynR; DNA-binding transcriptional regulator CynR
SCNpilot_BF_INOC_scaffold_2088_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15396..16091
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F0467
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47205.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_BF_INOC_scaffold_2088_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16228..16668
DNA (441bp) protein (147aa)
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cyanate hydratase (EC:4.2.1.104)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003827222
SCNpilot_BF_INOC_scaffold_2088_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16998..17819
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E384B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_18
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18220..18651
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368CC9E
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
nitrile hydratase
SCNpilot_BF_INOC_scaffold_2088_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18644..19012
DNA (369bp) protein (123aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Thiocyanate hydrolase subunit alpha id=12494715 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19047..19772
DNA (726bp) protein (242aa)
Thiocyanate hydrolase subunit gamma (EC:3.5.5.8) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiocyanate hydrolase subunit gamma (EC:3.5.5.8) id=12494714 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Thiocyanate hydrolase subunit gamma (EC:3.5.5.8)
SCNpilot_BF_INOC_scaffold_2088_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19800..20222
DNA (423bp) protein (141aa)
hypothetical protein id=12494713 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20341..21132
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369EE59
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ssuB; Aliphatic sulfonates import ATP-binding protein ssuB
SCNpilot_BF_INOC_scaffold_2088_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21221..22648
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000375796B
twin-arginine translocation pathway signal Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conserved protein of unknown function with twin-arginine translocation pathway signal peptide(similar to putative ABC transporter, periplasmic protein)
SCNpilot_BF_INOC_scaffold_2088_24
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22645..23466
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C971
twin-arginine translocation pathway signal Tax=RBG_16_Gammaproteobacteria_62_13__curated
ABC transporter permase
SCNpilot_BF_INOC_scaffold_2088_25
Thiobacillus thioparus, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24491
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367290B
Putative ABC transporter subunit {ECO:0000313|EMBL:BAE93388.1}; Flags: Fragment;; TaxID=931 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
putative binding-protein-dependent transport systems inner membrane component
SCNpilot_BF_INOC_scaffold_2088_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24498..24887
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBA04
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24929..25159
DNA (231bp) protein (77aa)
hypothetical protein id=12494706 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_28

Not on your lists

25236..26369
DNA (1134bp) protein (378aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=12494705 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Flavoprotein reductase {ECO:0000313|EMBL:EQD28033.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pyridine nucleotide-disulfide oxidoreductase
SCNpilot_BF_INOC_scaffold_2088_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26415..26801
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003687589
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2088_30
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26916..27143)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46X68_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ62265.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatub
Displaying items 1-30 of 41 in total

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