ggKbase home page

SCNpilot_BF_INOC_scaffold_2104

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2104_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiobacillus thioparus RepID=UPI00037D443B
SCNpilot_BF_INOC_scaffold_2104_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(363..1721)
DNA (1359bp) protein (453aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiobacillus thioparus RepID=UPI00037D443B
SCNpilot_BF_INOC_scaffold_2104_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1743..5822)
DNA (4080bp) protein (1360aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWE1_Thiobacillus_62_9_curated
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037807C3
SCNpilot_BF_INOC_scaffold_2104_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6053..6436)
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=12495331 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplL; 50S ribosomal protein L7/L12
SCNpilot_BF_INOC_scaffold_2104_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6509..7030)
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=1 Tax=Thiobacillus thioparus RepID=UPI00037236CC
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplJ; 50S ribosomal protein L10
SCNpilot_BF_INOC_scaffold_2104_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7305..8000)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Thiobacillus thioparus RepID=UPI00037B74CA
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L1
SCNpilot_BF_INOC_scaffold_2104_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8002..8433)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Thiobacillus thioparus RepID=UPI000373428D
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplK; 50S ribosomal protein L11
SCNpilot_BF_INOC_scaffold_2104_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8583..9110)
DNA (528bp) protein (176aa)
transcription antitermination protein NusG n=1 Tax=Thiobacillus thioparus RepID=UPI000364928B
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcription antitermination protein nusG
SCNpilot_BF_INOC_scaffold_2104_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9113..9460)
DNA (348bp) protein (116aa)
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE id=12495336 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secE; preprotein translocase subunit SecE
SCNpilot_BF_INOC_scaffold_2104_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9626..9721)
DNA (96bp) protein (32aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=GWE1_Thiobacillus_62_9_curated
elongation factor Tu, partial n=2 Tax=Thiobacillus denitrificans RepID=UPI000376B2A7
Displaying 10 items

View Taxonomy