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SCNpilot_BF_INOC_scaffold_2194

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2194_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..377)
DNA (375bp) protein (125aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E5696
SCNpilot_BF_INOC_scaffold_2194_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(374..1399)
DNA (1026bp) protein (342aa)
queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWE1_Thiobacillus_62_9_curated
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000379890C
queuosine biosynthesis protein
SCNpilot_BF_INOC_scaffold_2194_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1650..2798)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHC0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2194_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3493..4140
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380C552
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS85551.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
SCNpilot_BF_INOC_scaffold_2194_5
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4152..5138
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RSW5_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC22780.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
SCNpilot_BF_INOC_scaffold_2194_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5162..6217)
DNA (1056bp) protein (352aa)
endo-1,4-beta-xylanase (EC:3.2.1.8); K01181 endo-1,4-beta-xylanase [EC:3.2.1.8] Tax=GWE1_Thiobacillus_62_9_curated
endo-1,4-beta-xylanase (EC:3.2.1.8)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369FBE0
SCNpilot_BF_INOC_scaffold_2194_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6219..7169)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378BC58
polysaccharide deacetylase Tax=GWE1_Thiobacillus_62_9_curated
putative xylanase/chitin deacetylase
SCNpilot_BF_INOC_scaffold_2194_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7220..9541)
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003751AE8
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2194_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9538..10929)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377E47E
glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
glycosyl transferase
SCNpilot_BF_INOC_scaffold_2194_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10942..11925)
DNA (984bp) protein (328aa)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nucleoside-diphosphate sugar epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D2366
nucleoside-diphosphate-sugar epimerase
SCNpilot_BF_INOC_scaffold_2194_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12352..14019
DNA (1668bp) protein (556aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=GWE1_Thiobacillus_62_9_curated
glucose-6-phosphate isomerase (EC:5.3.1.9)
glucose-6-phosphate isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI0003727CF4
SCNpilot_BF_INOC_scaffold_2194_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14027..15037
DNA (1011bp) protein (337aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glucokinase (EC:2.7.1.2)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368649C
SCNpilot_BF_INOC_scaffold_2194_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15052..16371
DNA (1320bp) protein (440aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=GWE1_Thiobacillus_62_9_curated
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
glucose-1-phosphate adenylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036744A5
SCNpilot_BF_INOC_scaffold_2194_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16355..16726
DNA (372bp) protein (124aa)
glycosyl hydrolase family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Glycosyl hydrolase family 57 id=1332708 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyl hydrolase
Displaying 14 items

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