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SCNpilot_BF_INOC_scaffold_2239

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2239_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..166)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377CD87
Uncharacterized protein {ECO:0000313|EMBL:CDH46940.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
SCNpilot_BF_INOC_scaffold_2239_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(343..1446)
DNA (1104bp) protein (368aa)
putative D-amino acid oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003736CBE
D-amino acid oxidase
SCNpilot_BF_INOC_scaffold_2239_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1536..2060
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003781618
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_BF_INOC_scaffold_2239_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2236..2748
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367D6D2
putative type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT Tax=CG_Hydro_01
type-4 fimbrial pilin related signal peptide protein
SCNpilot_BF_INOC_scaffold_2239_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2757..3203
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370DFFE
Tfp pilus assembly protein PilV-like protein; K02671 type IV pilus assembly protein PilV Tax=CG_Hydro_01
type IV pilus modification protein PilV
SCNpilot_BF_INOC_scaffold_2239_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3200..4198
DNA (999bp) protein (333aa)
Type IV pilus assembly protein PilW n=1 Tax=Thauera sp. 28 RepID=N6YG18_9RHOO
hypothetical protein; K02672 type IV pilus assembly protein PilW Tax=CG_Hydro_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_2239_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4202..4765
DNA (564bp) protein (188aa)
Tfp pilus assembly protein PilX Tax=CG_Hydro_01
Tfp pilus assembly protein PilX id=12497896 bin=THIO_MID species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Putative type IV pilus assembly protein PilX
SCNpilot_BF_INOC_scaffold_2239_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4782..8222
DNA (3441bp) protein (1147aa)
fimbrial assembly protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6679F
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; K02674 type IV pilus assembly protein PilY1 Tax=CG_Hydro_01
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
SCNpilot_BF_INOC_scaffold_2239_9
unknown

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8232..8582
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2239_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8600..9025
DNA (426bp) protein (142aa)
prepilin-type N-terminal cleavage/methylation domain-containing protein id=12494085 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=CG_Hydro_01
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_BF_INOC_scaffold_2239_11
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9068..9238)
DNA (171bp) protein (57aa)
id=12494086 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
id=12494086 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2239_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9516..10217)
DNA (702bp) protein (234aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=12494087 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
Displaying 12 items

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