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SCNpilot_BF_INOC_scaffold_28997

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_28997_1
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

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comp(2..304)
DNA (303bp) protein (101aa)
putative diguanylate cyclase protein, sensory box/GGDEF domain id=12494868 bin=THIO_HI species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative diguanylate cyclase protein, sensory box/GGDEF domain
cyclic di-GMP signal transduction protein Tax=CG_Mariprof_02
SCNpilot_BF_INOC_scaffold_28997_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(385..1326)
DNA (942bp) protein (314aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1632857 species="Bacteria; Proteobacteria; Betap
cheB; two-component system, chemotaxis family, response regulator id=12494867 bin=THIO_HI species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cheB; two-component system, chemotaxis family, response regulator
SCNpilot_BF_INOC_scaffold_28997_3
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1323..1466)
DNA (144bp) protein (48aa)
cheB; two-component system, chemotaxis family, response regulator id=12494867 bin=THIO_HI species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cheB; two-component system, chemotaxis family, response regulator id=12494867 bin=THIO_HI species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_28997_4
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1479..1844)
DNA (366bp) protein (122aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; R
cheD; chemotaxis protein id=12494866 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cheD; chemotaxis protein
SCNpilot_BF_INOC_scaffold_28997_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1928..2731)
DNA (804bp) protein (268aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; R
cheR; chemotaxis protein methyltransferase id=12494865 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cheR; chemotaxis protein methyltransferase
SCNpilot_BF_INOC_scaffold_28997_6
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2798..2917)
DNA (120bp) protein (40aa)
CheW protein; K03408 purine-binding chemotaxis protein CheW id=12494864 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CheW protein; K03408 purine-binding chemotaxis protein CheW id=12494864 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Displaying 6 items

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