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SCNpilot_BF_INOC_scaffold_2923

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2923_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..434
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369E3BB
TonB domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
TonB domain-containing protein
SCNpilot_BF_INOC_scaffold_2923_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(456..854)
DNA (399bp) protein (133aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWE1_Thiobacillus_62_9_curated
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00036D897B
MerR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2923_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(943..1737)
DNA (795bp) protein (265aa)
cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cation-transporting ATPase transmembrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360D23F
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_2923_4
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

2238..3104
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY09777.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_BF_INOC_scaffold_2923_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3194..3928)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB1EB
cyclic nucleotide-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cyclic nucleotide-binding protein
SCNpilot_BF_INOC_scaffold_2923_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4056..4466
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373FC81
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5342
DNA (363bp) protein (121aa)
photosystem reaction center subunit H n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE011
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5748..6068
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003751182
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6338..6895
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003733B81
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NLP/P60 protein
SCNpilot_BF_INOC_scaffold_2923_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7173..7565
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003700191
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7699..9810
DNA (2112bp) protein (704aa)
katE; catalase; K03781 catalase [EC:1.11.1.6] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FEF56
catalase
SCNpilot_BF_INOC_scaffold_2923_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9856..10530
DNA (675bp) protein (225aa)
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
superoxide dismutase (EC:1.15.1.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D3FDC
SCNpilot_BF_INOC_scaffold_2923_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10563..10946
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BE557
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_14
unknown

Not on your lists

comp(10880..11641)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2923_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11829..12872
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE79B
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12934..14109
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374EE70
putative permease Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
permease
SCNpilot_BF_INOC_scaffold_2923_17
unknown

Not on your lists

comp(14168..14398)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2923_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14480..15172
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003734782
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98205.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_BF_INOC_scaffold_2923_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..15591
DNA (312bp) protein (104aa)
transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035DF00F
transport-associated
Transport-associated {ECO:0000313|EMBL:AAZ98204.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source
SCNpilot_BF_INOC_scaffold_2923_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15657..15872
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377657B
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_21
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15998..17035
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003822877
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AEJ02808.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon
SCNpilot_BF_INOC_scaffold_2923_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17117..17668
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363B462
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17734..18222
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FDEC9
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_24
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18234..18656)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA002
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE44229.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_2923_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18968..19873
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C5038
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27920.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
ribonuclease bn
SCNpilot_BF_INOC_scaffold_2923_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20000..20482)
DNA (483bp) protein (161aa)
hemerythrin n=1 Tax=Thiobacillus thioparus RepID=UPI0003710064
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20825..21799)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367BABB
Cytochrome C class I Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Cytochrome C class I
SCNpilot_BF_INOC_scaffold_2923_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21799..22536)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381040D
cytochrome C Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome C
SCNpilot_BF_INOC_scaffold_2923_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22686..23231)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038237D4
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2923_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23278..24360)
DNA (1083bp) protein (361aa)
cardiolipin synthetase 2 (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cardiolipin synthetase 2 (EC:2.7.8.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373EAD3
Displaying items 1-30 of 53 in total

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