ggKbase home page

SCNpilot_BF_INOC_scaffold_2965

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2965_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118..1116
DNA (999bp) protein (333aa)
Integron integrase id=1329025 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integron integrase Tax=GWE1_Thiobacillus_62_9_curated
integrase
SCNpilot_BF_INOC_scaffold_2965_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1116..1586
DNA (471bp) protein (157aa)
tRNA-adenosine deaminase (EC:3.5.4.-); K01485 cytosine deaminase [EC:3.5.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tRNA-adenosine deaminase (EC:3.5.4.-)
CRISPR-associated protein Csn1 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E76EF
SCNpilot_BF_INOC_scaffold_2965_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1583..2077
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003635963
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2965_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2587..2925)
DNA (339bp) protein (113aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003782C60
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_2965_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2925..3308)
DNA (384bp) protein (128aa)
peptidase M48 Ste24p n=1 Tax=Thiobacillus thioparus RepID=UPI00036C92A8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2965_6
unknown

Not on your lists

3329..3514
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2965_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4499)
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000255|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=DAPD_THIDA
SCNpilot_BF_INOC_scaffold_2965_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4528..5733)
DNA (1206bp) protein (402aa)
succinyldiaminopimelate transaminase (EC:2.6.1.11); K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinyldiaminopimelate transaminase (EC:2.6.1.11)
succinyldiaminopimelate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9D4D
SCNpilot_BF_INOC_scaffold_2965_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..6677
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BFF10
integral membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2965_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6670..7047
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=1367415 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2965_11
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7187..7930
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BD588
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ADC70748.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivib
SCNpilot_BF_INOC_scaffold_2965_12
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8103..8435)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369C05D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09590.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
SCNpilot_BF_INOC_scaffold_2965_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8495..9781)
DNA (1287bp) protein (429aa)
sugar kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003616A39
FGGY family sugar kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FGGY family sugar kinase
SCNpilot_BF_INOC_scaffold_2965_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..10205)
DNA (420bp) protein (140aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035CBE46
7-cyano-7-deazaguanine reductase
SCNpilot_BF_INOC_scaffold_2965_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10303..13803
DNA (3501bp) protein (1167aa)
condensin subunit Smc; K03529 chromosome segregation protein id=12495566 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
condensin subunit Smc
SCNpilot_BF_INOC_scaffold_2965_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13875..14873
DNA (999bp) protein (333aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_0
seryl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037294DB
Displaying 16 items

View Taxonomy