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SCNpilot_BF_INOC_scaffold_3051

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3051_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..845)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA repair protein
SCNpilot_BF_INOC_scaffold_3051_2
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1101..1328
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQ20_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM37748.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_BF_INOC_scaffold_3051_3

Not on your lists

comp(1236..2057)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F5E548
Uncharacterized protein {ECO:0000313|EMBL:EQD55425.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3051_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2086..3369)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UEJ8_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH83607.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
SCNpilot_BF_INOC_scaffold_3051_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3399..3764)
DNA (366bp) protein (122aa)
Transcriptional regulator, XRE family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JC78_BURP8
Putative transcriptional regulator {ECO:0000313|EMBL:KDM68374.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acid
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_3051_6
unknown

Not on your lists

3804..4214
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3051_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4303..4779
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=S2WT71_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD42556.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_BF_INOC_scaffold_3051_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4776..7745
DNA (2970bp) protein (990aa)
N-6 DNA methylase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CA3FC
N-6 DNA methylase {ECO:0000313|EMBL:GAO23799.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;
N-6 DNA methylase
SCNpilot_BF_INOC_scaffold_3051_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7742..8428
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6AK68_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EWC41218.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
hypothetical protein
SCNpilot_BF_INOC_scaffold_3051_10
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8526..9440)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023761FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08445.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
SCNpilot_BF_INOC_scaffold_3051_11

Not on your lists

comp(9437..9967)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PRC6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97481.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3051_12
unknown

Not on your lists

10412..10681
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3051_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10663..10791
DNA (129bp) protein (43aa)
Putative transmembrane protein id=1320296 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative transmembrane protein; K07007 Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
Displaying 13 items

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