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SCNpilot_BF_INOC_scaffold_3098

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3098_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=GWE1_Thiobacillus_62_9_curated
elongation factor Tu, partial n=2 Tax=Thiobacillus denitrificans RepID=UPI000376B2A7
SCNpilot_BF_INOC_scaffold_3098_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


108..416
DNA (309bp) protein (103aa)
id=12498442 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_3098_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


542..1186
DNA (645bp) protein (215aa)
50S ribosomal protein L3 n=1 Tax=Thiobacillus thioparus RepID=UPI000362CC67
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L3P
SCNpilot_BF_INOC_scaffold_3098_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1186..1803
DNA (618bp) protein (206aa)
50S ribosomal protein L4 id=1308461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=GWE1_Thiobacillus_62_9_curated
rplD; 50S ribosomal protein L4
SCNpilot_BF_INOC_scaffold_3098_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1803..2108
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Thiobacillus thioparus RepID=UPI00036FEBD3
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L23
SCNpilot_BF_INOC_scaffold_3098_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2120..2947
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Thiobacillus thioparus RepID=UPI00037A091A
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
SCNpilot_BF_INOC_scaffold_3098_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2963..3238
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003734CF2
rpsS; 30S ribosomal protein S19
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_3098_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3249..3578
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Thiobacillus thioparus RepID=UPI00036065C3
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_3098_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3588..4292
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Thiobacillus thioparus RepID=UPI00036504F8
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
SCNpilot_BF_INOC_scaffold_3098_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4276..4692
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Thiobacillus thioparus RepID=UPI0003690D45
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplP; 50S ribosomal protein L16
SCNpilot_BF_INOC_scaffold_3098_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4696..4890
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Thiobacillus thioparus RepID=UPI00037A7A7A
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=GWE1_Thiobacillus_62_9_curated
50S ribosomal protein L29
SCNpilot_BF_INOC_scaffold_3098_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4887..5150
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036439D6
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpsQ; 30S ribosomal protein S17
SCNpilot_BF_INOC_scaffold_3098_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5317..5685
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=12495313 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=GWE1_Thiobacillus_62_9_curated
rplN; 50S ribosomal protein L14
SCNpilot_BF_INOC_scaffold_3098_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5695..6018
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Thiobacillus thioparus RepID=UPI000376297B
50S ribosomal protein L24P; K02895 large subunit ribosomal protein L24 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L24
SCNpilot_BF_INOC_scaffold_3098_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6021..6488
DNA (468bp) protein (156aa)
50S ribosomal protein L5 n=1 Tax=Thiobacillus thioparus RepID=UPI0003704C36
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplE; 50S ribosomal protein L5
Displaying 15 items

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