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SCNpilot_BF_INOC_scaffold_3213

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3213_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..392
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3980
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(389..826)
DNA (438bp) protein (146aa)
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein id=12498663 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein
SCNpilot_BF_INOC_scaffold_3213_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1061..1615)
DNA (555bp) protein (185aa)
mogA; molybdenum cofactor biosynthesis protein MogA; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75] Tax=GWE1_Thiobacillus_62_9_curated
molybdenum cofactor biosynthesis protein MogA n=1 Tax=Thiobacillus thioparus RepID=UPI000363460F
mogA; molybdenum cofactor biosynthesis protein MogA
SCNpilot_BF_INOC_scaffold_3213_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1688..2179
DNA (492bp) protein (164aa)
thioredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4542
thioredoxin-like protein Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin-like protein
SCNpilot_BF_INOC_scaffold_3213_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2176..3366
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037ECCAE
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3384..4403)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EE63D
magnesium/cobalt transporter CorA; K03284 magnesium transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
magnesium/cobalt transporter CorA
SCNpilot_BF_INOC_scaffold_3213_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4558..5379
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003611103
phosphate/phosphonate ABC transporter periplasmic protein Tax=GWE1_Thiobacillus_62_9_curated
putative periplasmic binding protein
SCNpilot_BF_INOC_scaffold_3213_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5372..7768
DNA (2397bp) protein (799aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037974D4
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_BF_INOC_scaffold_3213_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7729..8850)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360C3BC
lipopolysaccharide core biosynthesis glycosyl transferase
Putative lipopolysaccharide core biosynthesis glycosyl transferase protein {ECO:0000313|EMBL:AAZ98092.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydroge
SCNpilot_BF_INOC_scaffold_3213_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8861..10234)
DNA (1374bp) protein (458aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=GWE1_Thiobacillus_62_9_curated
phosphomannomutase (EC:5.4.2.8)
phosphoglucomutase n=1 Tax=Thiobacillus thioparus RepID=UPI000366740E
SCNpilot_BF_INOC_scaffold_3213_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10275..11225)
DNA (951bp) protein (317aa)
alpha/beta hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036BAA9E
esterase/lipase/thioesterase family protein; K07019 Tax=GWE1_Thiobacillus_62_9_curated
esterase
SCNpilot_BF_INOC_scaffold_3213_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11279..11713)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FC7CD
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11759..11962)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F3BB2
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..12895)
DNA (921bp) protein (307aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWE1_Thiobacillus_62_9_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
branched-chain amino acid aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E91E3
SCNpilot_BF_INOC_scaffold_3213_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13006..13329)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003748EF5
putative dissimilatory sulfite reductase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dissimilatory sulfite reductase
SCNpilot_BF_INOC_scaffold_3213_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13384..16128)
DNA (2745bp) protein (915aa)
diguanylate cyclase/phosphodiesterase id=12494344 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PAS sensor diguanylate cyclase/phosphodiesterase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_BF_INOC_scaffold_3213_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16132..17328)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364E75C
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17297..17722)
DNA (426bp) protein (142aa)
hypothetical protein id=12494346 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17790..18836)
DNA (1047bp) protein (349aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=12494347 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=GWE1_Thiobacillus_62_9_curated
A/G-specific adenine glycosylase (EC:3.2.2.-)
SCNpilot_BF_INOC_scaffold_3213_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18915..21143)
DNA (2229bp) protein (743aa)
hypothetical protein id=12494348 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98082.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_3213_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21393..22583)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003605FE2
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3213_22
unknown

Not on your lists

22981..23532
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3213_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23628..23831
DNA (204bp) protein (68aa)
thiamine biosynthesis protein ThiS n=1 Tax=Thiobacillus thioparus RepID=UPI0003600A30
thiamine-biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=GWE1_Thiobacillus_62_9_curated
thiamine-biosynthesis protein ThiS
SCNpilot_BF_INOC_scaffold_3213_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23880..24668
DNA (789bp) protein (263aa)
thiazole synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003678A68
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=GWE1_Thiobacillus_62_9_curated
thiG; thiazole synthase
SCNpilot_BF_INOC_scaffold_3213_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24673..25356
DNA (684bp) protein (228aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] Tax=GWE1_Thiobacillus_62_9_curated
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AF4B7
SCNpilot_BF_INOC_scaffold_3213_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25379..26026
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F2C90
multiple antibiotic resistance (MarC)-like proteins; K05595 multiple antibiotic resistance protein Tax=GWE1_Thiobacillus_62_9_curated
multiple antibiotic resistance (MarC)-like proteins
SCNpilot_BF_INOC_scaffold_3213_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26157..27065
DNA (909bp) protein (303aa)
6-phosphogluconate dehydrogenase-like protein (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D1298
SCNpilot_BF_INOC_scaffold_3213_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27067..28557
DNA (1491bp) protein (497aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) rbh
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose 6-phosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7284
SCNpilot_BF_INOC_scaffold_3213_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28557..29249
DNA (693bp) protein (231aa)
6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=GWE1_Thiobacillus_62_9_curated
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase id=1350219 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_3213_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29250..30164)
DNA (915bp) protein (305aa)
GTPase YlqF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037556A9
GTPase; K14540 ribosome biogenesis GTPase A Tax=GWE1_Thiobacillus_62_9_curated
GTPase
Displaying 30 items

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