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SCNpilot_BF_INOC_scaffold_3370

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3370_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..848)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DB234
putative esterase of the alpha-beta hydrolase superfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
patatin
SCNpilot_BF_INOC_scaffold_3370_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1111..1680)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F806C
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098
SCNpilot_BF_INOC_scaffold_3370_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1761..2468)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85
hypothetical protein; K09915 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2600..3091
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A661E
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
putative Signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_3370_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3093..3383
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381E53F
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3420..3986)
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12494696 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4182..4982
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC7C
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE1_Thiobacillus_62_9_curated
sigma-24 (FecI)
SCNpilot_BF_INOC_scaffold_3370_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..5737
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E9D15
transmembrane transcriptional regulator (anti-sigma factor) Tax=GWE1_Thiobacillus_62_9_curated
transmembrane transcriptional regulator (anti-sigma factor)
SCNpilot_BF_INOC_scaffold_3370_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5808..6671)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003733210
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6661..7197)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE9E7
sensor diguanylate cyclase/phosphodiesterase, PAS, PAS and PAC domain-containing Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sensor diguanylate cyclase/phosphodiesterase, PAS and PAS domain-containing
SCNpilot_BF_INOC_scaffold_3370_11
unknown

Not on your lists

8363..8848
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3370_12
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9319..9951)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS59366.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCNpilot_BF_INOC_scaffold_3370_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10517..11449
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364FB08
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..12504
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46); K00651 homoserine O-succinyltransferase [EC:2.3.1.46] Tax=GWE1_Thiobacillus_62_9_curated
homoserine O-succinyltransferase (EC:2.3.1.46)
homoserine O-succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CFBA2
SCNpilot_BF_INOC_scaffold_3370_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12501..13595
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379DE55
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter permease
SCNpilot_BF_INOC_scaffold_3370_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13595..14362
DNA (768bp) protein (256aa)
iron ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003822162
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_3370_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14352..15299
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DA0D9
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC-type transport system periplasmic component
SCNpilot_BF_INOC_scaffold_3370_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15296..15898
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609858
putative lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipoprotein
SCNpilot_BF_INOC_scaffold_3370_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..16374
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE73C
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16394..17074)
DNA (681bp) protein (227aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037057FE
hypothetical protein; K09792 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_3370_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17071..18429)
DNA (1359bp) protein (453aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003777C93
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Th
SCNpilot_BF_INOC_scaffold_3370_22
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18455..19906)
DNA (1452bp) protein (484aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MW75_9CYAN
putative ATPase (AAA+ superfamily) Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
putative ATPase (AAA+ superfamily)
SCNpilot_BF_INOC_scaffold_3370_23
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19999..21507)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035DFC8A
DNA methyltransferase Tax=RBG_16_Betaproteobacteria_56_24_curated
DNA methyltransferase
SCNpilot_BF_INOC_scaffold_3370_24
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21625..22803)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031D43C5
DNA methyltransferase Tax=CG_Rhodof_03
DNA methyltransferase
SCNpilot_BF_INOC_scaffold_3370_25
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22809..23699)
DNA (891bp) protein (297aa)
DNA-damage-inducible protein D n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XLH8_9GAMM
DNA-damage-inducible protein D {ECO:0000313|EMBL:EGQ60571.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sourc
dinD; DNA-damage-inducible protein D
SCNpilot_BF_INOC_scaffold_3370_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23756..24535)
DNA (780bp) protein (260aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
exodeoxyribonuclease III n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3EF3
SCNpilot_BF_INOC_scaffold_3370_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24563..25201
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003806D0B
SCNpilot_BF_INOC_scaffold_3370_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25140..25793
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E4CAF
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3370_29
unknown

Not on your lists

comp(25843..25911)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 29 items

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