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SCNpilot_BF_INOC_scaffold_3951

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3951_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..144
DNA (144bp) protein (48aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiol:disulfide interchange protein DsbD (EC:1.8.1.8)
thiol:disulfide interchange protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036533EC
SCNpilot_BF_INOC_scaffold_3951_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196..1263)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E9F0D
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1260..2549)
DNA (1290bp) protein (430aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F6131
SCNpilot_BF_INOC_scaffold_3951_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2561..3196)
DNA (636bp) protein (212aa)
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiamine monophosphate synthase (EC:2.5.1.3)
thiamine-phosphate pyrophosphorylase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D2BB3
SCNpilot_BF_INOC_scaffold_3951_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3205..4047)
DNA (843bp) protein (281aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWE1_Thiobacillus_62_9_curated
phosphomethylpyrimidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035C6D03
phosphomethylpyrimidine kinase
SCNpilot_BF_INOC_scaffold_3951_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4367..4549
DNA (183bp) protein (61aa)
rubredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037B7278
rubredoxin protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rubredoxin protein
SCNpilot_BF_INOC_scaffold_3951_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4712..5617
DNA (906bp) protein (302aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12495276 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5766..6179
DNA (414bp) protein (138aa)
pilus response regulator PilG n=1 Tax=Thiobacillus thioparus RepID=UPI00035C1E1B
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_BF_INOC_scaffold_3951_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6201..6566
DNA (366bp) protein (122aa)
chemotaxis protein CheY n=1 Tax=Thiobacillus thioparus RepID=UPI0003600469
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_BF_INOC_scaffold_3951_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6577..7098
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037400FD
CheW protein; K02659 twitching motility protein PilI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
chemotaxis protein CheW
SCNpilot_BF_INOC_scaffold_3951_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..9272
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036680A7
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ98502.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
chemotaxis sensory transducer
SCNpilot_BF_INOC_scaffold_3951_12
unknown

Not on your lists

comp(9350..10678)
DNA (1329bp) protein (443aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3951_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11522..15436
DNA (3915bp) protein (1305aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DBE96
signal transduction histidine kinase CheA-like protein; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/respon
signal transduction histidine kinase CheA-like protein
SCNpilot_BF_INOC_scaffold_3951_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15485..16537)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374EAEF
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16659..18491)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D3E26
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18622..19155)
DNA (534bp) protein (178aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003695593
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19209..20534)
DNA (1326bp) protein (442aa)
ATP-dependent protease n=1 Tax=Thiobacillus thioparus RepID=UPI000374AC9E
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=GWE1_Thiobacillus_62_9_curated
hslU; ATP-dependent protease ATP-binding subunit HslU
SCNpilot_BF_INOC_scaffold_3951_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20613..21146)
DNA (534bp) protein (178aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=GWE1_Thiobacillus_62_9_curated
ATP-dependent protease subunit HslV id=1328063 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ATP-dependent protease peptidase subunit
SCNpilot_BF_INOC_scaffold_3951_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21296..22408)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B5D10
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3951_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22433..23218)
DNA (786bp) protein (262aa)
zinc/manganese transport system permease; K02075 zinc/manganese transport system permease protein id=12498699 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
zinc/manganese transport system permease; K02075 zinc/manganese transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
zinc/manganese transport system permease
SCNpilot_BF_INOC_scaffold_3951_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23215..23679)
DNA (465bp) protein (155aa)
zinc/manganese transport system substrate-binding protein; K02077 zinc/manganese transport system substrate-binding protein id=12498700 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
zinc/manganese transport system substrate-binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
zinc/manganese transport system substrate-binding protein
SCNpilot_BF_INOC_scaffold_3951_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24097..25443)
DNA (1347bp) protein (449aa)
hypothetical protein id=12498701 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying 22 items

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